Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq6500 141 1e-31 seq3052 141 1e-31 seq3048 141 1e-31 seq2968 141 1e-31 seq2949 141 1e-31 seq2931 141 1e-31 seq2924 141 1e-31 seq2237 141 1e-31 seq2196 141 1e-31 seq9273 120 5e-25 seq9070 87.8 3e-15 >seq6500 Length=1050 Score = 141 bits (156), Expect = 1e-31 Identities = 98/111 (88%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 763 GTCACGTTCGTTATCGGAATTAACCAGACAAATCATTCCACGAACTAAGAACGGCCATGC 704 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCCTCGATA 269 ||||| |||| || | | |||||||||||| |||||||| |||||||| Sbjct 703 ACCACTACCCTTAAATTTGAGAAAGAGCTATTAATCTGTCTCACCTCGATA 653 Score = 78.8 bits (86), Expect = 1e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||||||||||||| |||||||||||||||||||||||| |||||||||| || Sbjct 986 CATTGTAGCGCGCGTGTAGCCCAGAACATCTAAGGGCATCACGGACCTGTTATCGC 931 >seq3052 Length=1008 Score = 141 bits (156), Expect = 1e-31 Identities = 98/111 (88%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 160 GTCACGTTCGTTATCGGAATTAACCAGACAAATCATTCCACGAACTAAGAACGGCCATGC 219 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCCTCGATA 269 ||||| |||| || | | |||||||||||| |||||||| |||||||| Sbjct 220 ACCACTACCCTTAAATTTGAGAAAGAGCTATTAATCTGTCTCACCTCGATA 270 >seq3048 Length=1162 Score = 141 bits (156), Expect = 1e-31 Identities = 98/111 (88%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 776 GTCACGTTCGTTATCGGAATTAACCAGACAAATCATTCCACGAACTAAGAACGGCCATGC 717 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCCTCGATA 269 ||||| |||| || | | |||||||||||| |||||||| |||||||| Sbjct 716 ACCACTACCCTTAAATTTGAGAAAGAGCTATTAATCTGTCTCACCTCGATA 666 Score = 78.8 bits (86), Expect = 1e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||||||||||||| |||||||||||||||||||||||| |||||||||| || Sbjct 999 CATTGTAGCGCGCGTGTAGCCCAGAACATCTAAGGGCATCACGGACCTGTTATCGC 944 >seq2968 Length=1091 Score = 141 bits (156), Expect = 1e-31 Identities = 98/111 (88%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 1083 GTCACGTTCGTTATCGGAATTAACCAGACAAATCATTCCACGAACTAAGAACGGCCATGC 1024 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCCTCGATA 269 ||||| |||| || | | |||||||||||| |||||||| |||||||| Sbjct 1023 ACCACTACCCTTAAATTTGAGAAAGAGCTATTAATCTGTCTCACCTCGATA 973 >seq2949 Length=1006 Score = 141 bits (156), Expect = 1e-31 Identities = 98/111 (88%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 813 GTCACGTTCGTTATCGGAATTAACCAGACAAATCATTCCACGAACTAAGAACGGCCATGC 754 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCCTCGATA 269 ||||| |||| || | | |||||||||||| |||||||| |||||||| Sbjct 753 ACCACTACCCTTAAATTTGAGAAAGAGCTATTAATCTGTCTCACCTCGATA 703 >seq2931 Length=1007 Score = 141 bits (156), Expect = 1e-31 Identities = 98/111 (88%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 861 GTCACGTTCGTTATCGGAATTAACCAGACAAATCATTCCACGAACTAAGAACGGCCATGC 802 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCCTCGATA 269 ||||| |||| || | | |||||||||||| |||||||| |||||||| Sbjct 801 ACCACTACCCTTAAATTTGAGAAAGAGCTATTAATCTGTCTCACCTCGATA 751 >seq2924 Length=1091 Score = 141 bits (156), Expect = 1e-31 Identities = 98/111 (88%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 558 GTCACGTTCGTTATCGGAATTAACCAGACAAATCATTCCACGAACTAAGAACGGCCATGC 617 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCCTCGATA 269 ||||| |||| || | | |||||||||||| |||||||| |||||||| Sbjct 618 ACCACTACCCTTAAATTTGAGAAAGAGCTATTAATCTGTCTCACCTCGATA 668 Score = 82.4 bits (90), Expect = 1e-13 Identities = 79/100 (79%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || ||||||||||||| |||||||||||||||||||||||| |||||||||| | ||| Sbjct 334 CATTGTAGCGCGCGTGTAGCCCAGAACATCTAAGGGCATCACGGACCTGTTATCGTCTCG 393 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC 116 | | || || ||| | | ||| |||| ||||| ||| Sbjct 394 ATC-TCATTTTGCTAAACACAAATTGTCCTGCTAAGCAGC 432 >seq2237 Length=1108 Score = 141 bits (156), Expect = 1e-31 Identities = 98/111 (88%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 249 GTCACGTTCGTTATCGGAATTAACCAGACAAATCATTCCACGAACTAAGAACGGCCATGC 308 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCCTCGATA 269 ||||| |||| || | | |||||||||||| |||||||| |||||||| Sbjct 309 ACCACTACCCTTAAATTTGAGAAAGAGCTATTAATCTGTCTCACCTCGATA 359 Score = 78.8 bits (86), Expect = 1e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||||||||||||| |||||||||||||||||||||||| |||||||||| || Sbjct 26 CATTGTAGCGCGCGTGTAGCCCAGAACATCTAAGGGCATCACGGACCTGTTATCGC 81 >seq2196 Length=1297 Score = 141 bits (156), Expect = 1e-31 Identities = 98/111 (88%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 508 GTCACGTTCGTTATCGGAATTAACCAGACAAATCATTCCACGAACTAAGAACGGCCATGC 567 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCCTCGATA 269 ||||| |||| || | | |||||||||||| |||||||| |||||||| Sbjct 568 ACCACTACCCTTAAATTTGAGAAAGAGCTATTAATCTGTCTCACCTCGATA 618 Score = 75.2 bits (82), Expect = 2e-11 Identities = 50/56 (89%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||||||||||||| ||||||||||||| |||||||||| |||||||||| || Sbjct 285 CATTGTAGCGCGCGTGTAGCCCAGAACATCTGAGGGCATCACGGACCTGTTATCGC 340 >seq9273 Length=2239752 Score = 120 bits (132), Expect = 5e-25 Identities = 80/88 (91%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 1200216 GTCACGTTCGTTATCGGAATTAACCAGACAAATCATTCCACGAACTAAGAACGGCCATGC 1200157 Query 219 ACCACCACCCATAGAATCAAGAAAGAGC 246 ||||| |||| || ||| ||||||||| Sbjct 1200156 ACCACTACCCTTA-AATTGAGAAAGAGC 1200130 >seq9070 Length=277363 Score = 87.8 bits (96), Expect = 3e-15 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 || ||||| ||||||||||||||||||||||| |||| || | | |||||||||||| | Sbjct 120048 CATTCCACGAACTAAGAACGGCCATGCACCACTACCCTTAAATTTGAGAAAGAGCTATTA 119989 Query 252 ATCTGTCCTCCCTCGATA 269 ||||||| |||||||| Sbjct 119988 ATCTGTCTCACCTCGATA 119971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796725959352