Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq8091 291 1e-76 seq9196 251 1e-64 seq46 241 2e-61 seq8452 237 3e-60 seq4639 219 7e-55 seq8855 109 9e-22 >seq8091 Length=1106 Score = 291 bits (322), Expect = 1e-76 Identities = 217/250 (87%), Gaps = 3/250 (1%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 968 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 910 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | |||||||| |||| |||||| ||||| ||||||| |||||||||||||||||| Sbjct 909 GAAAGGGTGAACGATCCTACGCTTTGTGAATTTTGCTTCGCAATGATAGGAAGAGCCGAC 850 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 849 ATCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCC 790 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGATAGG 270 |||||||||||||||| ||||||| | || ||| ||| | | ||||||||| ||| Sbjct 789 TGTGGTAACTTTTCTGACACCTCTTG-CTAAAAACTCGTTAAACCAAAAGGATCGTGAGG 731 Query 271 CCACACTTTC 280 || ||||| Sbjct 730 CCTAGCTTTC 721 >seq9196 Length=381041 Score = 251 bits (278), Expect = 1e-64 Identities = 192/223 (86%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 59 CATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 118 || |||||||||||||||||||||||||||| | | ||||||||||||| |||||| Sbjct 45067 CACGACGGTCTAAACCCAGCTCACGTTCCCT-TGAAAGGGTGAACAATCCTACGCTTTGT 45009 Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 ||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 45008 GAATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCCACGTCGCT 44949 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 44948 ATGAACGCTTGGCGGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG- 44890 Query 239 CTCAAATTTCGAGGGA-CTAAAGGATCGATAGGCCACACTTTC 280 || ||| ||| | | ||||||||| ||||| ||||| Sbjct 44889 CTAAAAACTCGTTAAACCAAAAGGATCGTGAGGCCTAGCTTTC 44847 >seq46 Length=10096 Score = 241 bits (266), Expect = 2e-61 Identities = 164/183 (90%), Gaps = 1/183 (1%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 6700 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 6642 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| ||||||| | ||||||||||||||| Sbjct 6641 GAAAGGGTGAACAATCCTACGCTTTGTGAATTTTGCTTCGCAACTATAGGAAGAGCCGAC 6582 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||| ||| ||||||||||||| ||||||||||||||||||| Sbjct 6581 ATCGAAGGATCAAAAAGCCACGCCGCCATGAACGCTTGGCGGCCACAAGCCAGTTATCCC 6522 Query 212 TGT 214 ||| Sbjct 6521 TGT 6519 >seq8452 Length=10470 Score = 237 bits (262), Expect = 3e-60 Identities = 162/181 (90%), Gaps = 1/181 (1%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | Sbjct 1112 CACCAGTAGGGTAAAACTAACCTGTATCATGACGGTCTAAACCCAGCTCACGTTGCCT-T 1054 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| ||||||| |||||||||||||||||| Sbjct 1053 GAAAGGGTGAACAATCCTACGCTTTGTGAATTTTGCTTCGCAATGATAGGAAGAGCCGAC 994 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| |||| |||||||||||||||| ||||||||| ||||| ||| Sbjct 993 ATCGAAGGATCAAAAAGCCACGTTGCTATGAACGCTTGGCGGCCACAAGCAAGTTAGCCC 934 Query 212 T 212 | Sbjct 933 T 933 >seq4639 Length=1858 Score = 219 bits (242), Expect = 7e-55 Identities = 147/163 (90%), Gaps = 1/163 (1%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 ||| |||| |||||||||||||||||||||||||||| | | ||||||||||||| ||| Sbjct 439 CTGCCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-TGAAAGGGTGAACAATCCTACG 381 Query 113 CTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAAC 172 ||| ||||| ||||||| |||||||||||||||||||||||||||||||||||| || Sbjct 380 CTTTGTGAATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCCAC 321 Query 173 GTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 ||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 320 GTCGCTATGAACGCTTGGCGGCCACAAGCCAGTCATCCCTGTG 278 >seq8855 Length=241467 Score = 109 bits (120), Expect = 9e-22 Identities = 107/134 (80%), Gaps = 3/134 (2%) Strand=Plus/Plus Query 78 CTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA 137 |||||||||||| | | |||| || ||||| || || |||| |||||| |||| Sbjct 18930 CTCACGTTCCCT-TCAAAGGGTAAA-AATCCTTCGGTTTGACAATTTAGCTTCGCAATGA 18987 Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197 |||| ||||| |||| ||||| | |||||||| | ||||||||||||||||| ||||| Sbjct 18988 TAGGGAGAGCTGACAACGAAG-ACCAAAAAGCCTCTTCGCTATGAACGCTTGGTGGCCAC 19046 Query 198 AAGCCAGTTATCCC 211 |||||||||||||| Sbjct 19047 AAGCCAGTTATCCC 19060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854318045952