Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2924 102 2e-19 seq3048 100 5e-19 seq2196 96.9 7e-18 seq6500 78.8 2e-12 seq2237 78.8 2e-12 >seq2924 Length=1091 Score = 102 bits (112), Expect = 2e-19 Identities = 155/218 (71%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 111 GAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 ||| | |||||||||| |||||||||||||||||||||||| ||||||||||||| || Sbjct 392 GAGACGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTACACGCGCGCTACAATGT 333 Query 171 CAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTC 230 | || || | || ||| ||| ||| ||| |||| | ||| || | Sbjct 332 GGGCAGCAGCGTG----TCTCCTATTCCGAGAGGAACGGGAAATC-ACTCAAATGCTCAC 278 Query 231 GTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGT 290 | | ||||| | ||||||| | | | | ||| |||| |||||||| || Sbjct 277 TTAGTAGGGATTATGGATTGCAA-TGGTCCATATGAACTCGGAACTTCTAGTAAGTGCTG 219 Query 291 GTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| ||| ||||||||||||||||||||||||||| Sbjct 218 GTCATTAGCCAGCGTTGATTACGTCCCTGCCCTTTGTA 181 >seq3048 Length=1162 Score = 100 bits (110), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 || |||||||||| |||||||||||||||||||||||| ||||||||||||| || | Sbjct 944 GCGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTACACGCGCGCTACAATGTGGG 1003 Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233 || || | || ||| ||| ||| ||| |||| | ||| || | | Sbjct 1004 CAGCAGCGTG----TCTCCTATTCCGAGAGGAACGGGAAATC-ACTCAAATGCTCACTTA 1058 Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293 | ||||| | ||||||| | | | | ||| |||| |||||||| || ||| Sbjct 1059 GTAGGGATTATGGATTGCAA-TGGTCCATATGAACTCGGAACTTCTAGTAAGTGCTGGTC 1117 Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||| ||||||||||||||||||||||||||| Sbjct 1118 ATTAGCCAGCGTTGATTACGTCCCTGCCCTTTGTA 1152 >seq2196 Length=1297 Score = 96.9 bits (106), Expect = 7e-18 Identities = 152/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 || |||||||||| |||||||||| ||||||||||||| ||||||||||||| || | Sbjct 340 GCGATAACAGGTCCGTGATGCCCTCAGATGTTCTGGGCTACACGCGCGCTACAATGTGGG 281 Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233 || || | || ||| ||| ||| ||| |||| | ||| || | | Sbjct 280 CAGCAGCGTG----TCTCCTATTCCGAGAGGAACGGGAAATC-ACTCAAATGCTCACTTA 226 Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293 | ||||| | ||||||| | | | | ||| |||| |||||||| || ||| Sbjct 225 GTAGGGATTATGGATTGCAA-TGGTCCATATGAACTCGGAACTTCTAGTAAGTGCTGGTC 167 Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||| ||||||||||||||||||||||||||| Sbjct 166 ATTAGCCAGCGTTGATTACGTCCCTGCCCTTTGTA 132 >seq6500 Length=1050 Score = 78.8 bits (86), Expect = 2e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169 || |||||||||| |||||||||||||||||||||||| ||||||||||||| || Sbjct 931 GCGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTACACGCGCGCTACAATG 986 >seq2237 Length=1108 Score = 78.8 bits (86), Expect = 2e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169 || |||||||||| |||||||||||||||||||||||| ||||||||||||| || Sbjct 81 GCGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTACACGCGCGCTACAATG 26 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947109144576