Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq9097 343 4e-92 seq9572 334 2e-89 seq3009 334 2e-89 seq9590 318 2e-84 seq9580 264 3e-68 seq2968 221 4e-55 >seq9097 Length=853805 Score = 343 bits (380), Expect = 4e-92 Identities = 396/521 (76%), Gaps = 29/521 (6%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CA--AAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||| | || || |||||| ||| ||||| | ||||||||| Sbjct 801300 ACTCATTCCAATTATGAAACATCATTAAAGAGTTTCATATTGTTATTTCTCGTCACTACC 801241 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 801240 TCCCCGTGCCGGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCAT 801181 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct 801180 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACCATGGT 801121 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 || || |||| |||||||| | ||||||||||||||| ||||| || | ||| ||| Sbjct 801120 AGTCCTCTATACTACCATCCATAGTTGATAGGGCAGATATTTGCGAGATCTGTCGTCGGT 801061 Query 240 TCAAGGCCATGCGAT-----TCGTTA-----AGTTATTATGAATCACCAAGGAGCCCCGA 289 | || |||| |||| || ||| | || | ||| | || |||| || Sbjct 801060 GCGAGACCATACGATCGGCATCATTATCCAGACTTCAACTCAATGA-CACGGAGAACC-- 801004 Query 290 AGGGCG-TTGGTTTTTTATCTAATAAATACACCCCTTC---CGAAGTCGGGGTTTTTAGC 345 ||| |||| ||| ||||||| | |||| ||| ||| ||| || | | || Sbjct 801003 --CGCGATTGG---TTTGACTAATAAGTGCACCAGTTCCGGCGAGGTCCTGGCATGTTGC 800949 Query 346 ATGTATTAGCTCTAGAATTACCACGGTTATCCATGT-AGTAAGGT-ACTATCAAATAAAC 403 |||||||||||||||| || |||| |||||||| || | |||| | | ||| |||| Sbjct 800948 ATGTATTAGCTCTAGATTTTCCACAGTTATCCAAGTAACTAAGTTGATGATCTCGTAAAT 800889 Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACAT 463 ||| ||| | || |||||| | || ||||||| || | || || ||||||||||| Sbjct 800888 TATAGCTGTTATACTGAGCCTTATGCGGTTTCACATTA-AATCTGTTTGTACTTAGACAT 800830 Query 464 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||| ||||||||| ||| ||| | |||||| || Sbjct 800829 GCATGGCTTAACCTTTGAGACGAGCGTAT-ATTACTGGTAG 800790 >seq9572 Length=1089 Score = 334 bits (370), Expect = 2e-89 Identities = 393/521 (75%), Gaps = 29/521 (6%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CA--AAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||| | || || |||||| ||| ||||| | ||||||||| Sbjct 967 ACTCATTCCAATTATGAAACATCATTAAAGAGTTTCATATTGTTATTTCTCGTCACTACC 908 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 907 TCCCCGTGCCGGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCAT 848 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct 847 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACCATGGT 788 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 || || |||| |||||||| | ||||||||||||||| ||||| || | ||| ||| Sbjct 787 AGTCCTCTATACTACCATCCATAGTTGATAGGGCAGATATTTGCGAGATCTGTCGTCGGT 728 Query 240 TCAAGGCCATGCGAT-----TCGTTA-----AGTTATTATGAATCACCAAGGAGCCCCGA 289 | || |||| |||| || ||| | || | ||| | || |||| || Sbjct 727 GCGAGACCATACGATCGGCATCATTATCCAGACTTCAACTCAATGA-CACGGAGAACC-- 671 Query 290 AGGGCG-TTGGTTTTTTATCTAATAAATACACCCCTTC---CGAAGTCGGGGTTTTTAGC 345 ||| |||| ||| ||||||| | | || ||| ||| ||| || | | || Sbjct 670 --CGCGATTGG---TTTGACTAATAAGTGCGCCAGTTCCGGCGAGGTCCTGGCATGTTGC 616 Query 346 ATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT--ACTATCAAATAAAC 403 |||||||||||||||| || |||| |||||||| ||| | || | ||| |||| Sbjct 615 ATGTATTAGCTCTAGATTTTCCACAGTTATCCAAGTAACTATGTTGATGATCTCGTAAAT 556 Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACAT 463 ||| ||| | || |||||| | || ||||||| || | || || ||||||||||| Sbjct 555 TATAGCTGTTATACTGAGCCTTATGCGGTTTCACATTA-AATCTGTTTGTACTTAGACAT 497 Query 464 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||| ||||||||| ||| ||| | |||||| || Sbjct 496 GCATGGCTTAACCTTTGAGACGAGCGTAT-ATTACTGGTAG 457 >seq3009 Length=1013 Score = 334 bits (370), Expect = 2e-89 Identities = 393/521 (75%), Gaps = 29/521 (6%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CA--AAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||| | || || |||||| ||| ||||| | ||||||||| Sbjct 877 ACTCATTCCAATTATGAAACATCATTAAAGAGTTTCATATTGTTATTTCTCGTCACTACC 818 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 817 TCCCCGTGCCGGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCAT 758 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct 757 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACCATGGT 698 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 || || |||| |||||||| | ||| ||||||||||| ||||| || | ||| ||| Sbjct 697 AGTCCTCTATACTACCATCCATAGTCGATAGGGCAGATATTTGCGAGATCTGTCGTCGGT 638 Query 240 TCAAGGCCATGCGAT-----TCGTTA-----AGTTATTATGAATCACCAAGGAGCCCCGA 289 | || |||| |||| || ||| | || | ||| | || |||| || Sbjct 637 GCGAGACCATACGATCGGCATCATTATCCAGACTTCAACTCAATGA-CACGGAGAACC-- 581 Query 290 AGGGCG-TTGGTTTTTTATCTAATAAATACACCCCTTC---CGAAGTCGGGGTTTTTAGC 345 ||| |||| ||| ||||||| | |||| ||| ||| ||| || | | || Sbjct 580 --CGCGATTGG---TTTGACTAATAAGTGCACCAGTTCCGGCGAGGTCCTGGCATGTTGC 526 Query 346 ATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT--ACTATCAAATAAAC 403 |||||||||||||||| || |||| |||||||| ||| | || | ||| |||| Sbjct 525 ATGTATTAGCTCTAGATTTTCCACAGTTATCCAAGTAACTATGTTGATGATCTCGTAAAT 466 Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACAT 463 ||| ||| | || |||||| | || ||||||| || | || || ||||||||||| Sbjct 465 TATAGCTGTTATACTGAGCCTTATGCGGTTTCACATTA-AATCTGTTTGTACTTAGACAT 407 Query 464 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||| ||||||||| ||| ||| | |||||| || Sbjct 406 GCATGGCTTAACCTTTGAGACGAGCGTAT-ATTACTGGTAG 367 >seq9590 Length=1124 Score = 318 bits (352), Expect = 2e-84 Identities = 374/497 (75%), Gaps = 28/497 (6%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACC-CA--AAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||| | || || |||||| ||| ||||| | ||||||||| Sbjct 637 ACTCATTCCAATTATGAAACATCATTAAAGAGTTTCATATTGTTATTTCTCGTCACTACC 696 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 697 TCCCCGTGCCGGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCAT 756 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||| Sbjct 757 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGCTGCAACCATGGT 816 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 || || |||| |||||||| | ||||||||||||||| ||||| || | ||| ||| Sbjct 817 AGTCCTCTATACTACCATCCATAGTTGATAGGGCAGATATTTGCGAGATCTGTCGTCGGT 876 Query 240 TCAAGGCCATGCGAT-----TCGTTA-----AGTTATTATGAATCACCAAGGAGCCCCGA 289 | || |||| |||| || ||| | || | ||| | || |||| || Sbjct 877 GCGAGACCATACGATCGGCATCATTATCCAGACTTCAACTCAATGA-CACGGAGAACC-- 933 Query 290 AGGGCG-TTGGTTTTTTATCTAATAAATACACCCCTTC---CGAAGTCGGGGTTTTTAGC 345 ||| |||| ||| ||||||| | |||| ||| ||| ||| || | | || Sbjct 934 --CGCGATTGG---TTTGACTAATAAGTGCACCAGTTCCGGCGAGGTCCTGGCATGTTGC 988 Query 346 ATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT--ACTATCAAATAAAC 403 |||||||||||||||| || |||| |||||||| ||| | || | ||| |||| Sbjct 989 ATGTATTAGCTCTAGATTTTCCACAGTTATCCAAGTAACTATGTTGATGATCTCGTAAAT 1048 Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACAT 463 ||| ||| | || |||||| | || ||||||| || | || || ||||||||||| Sbjct 1049 TATAGCTGTTATACTGAGCCTTATGCGGTTTCACATTA-AATCTGTTTGTACTTAGACAT 1107 Query 464 GCATGGCTTAATCTTTG 480 ||||||||||| ||||| Sbjct 1108 GCATGGCTTAACCTTTG 1124 >seq9580 Length=1030 Score = 264 bits (292), Expect = 3e-68 Identities = 213/255 (84%), Gaps = 3/255 (1%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CA--AAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||| | || || |||||| ||| ||||| | ||||||||| Sbjct 353 ACTCATTCCAATTATGAAACATCATTAAAGAGTTTCATATTGTTATTTCTCGTCACTACC 294 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 293 TCCCCGTGCCGGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCAT 234 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct 233 TTCTCGGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACCATGGT 174 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 || || |||| |||||||| | ||||||||||||||| ||||| || | ||| ||| Sbjct 173 AGTCCTCTATACTACCATCCATAGTTGATAGGGCAGATATTTGCGAGATCTGTCGTCGGT 114 Query 240 TCAAGGCCATGCGAT 254 | || |||| |||| Sbjct 113 GCGAGACCATACGAT 99 >seq2968 Length=1091 Score = 221 bits (244), Expect = 4e-55 Identities = 172/200 (86%), Gaps = 5/200 (3%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CA--AAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||| | || || |||||| ||| ||||| | ||||||||| Sbjct 203 ACTCATTCCAATTATGAAACATCATTAAAGAGTTTCATATTGTTATTTCTCGTCACTACC 144 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 143 TCCCCGTGCCGGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCAT 84 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||| Sbjct 83 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTA-CCGTTGCAACCATGGT 25 Query 180 AGGCCAC-TATCCTACCATC 198 || || | ||| |||||||| Sbjct 24 AGTCCTCTTATACTACCATC 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510255122432