Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq9207 489 1e-133 seq9254 203 3e-47 >seq9207 Length=1443628 Score = 489 bits (542), Expect = 1e-133 Identities = 1228/1854 (66%), Gaps = 35/1854 (2%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || ||||| ||||||||||| || | |||| |||||| | |||||||||||||| ||| Sbjct 1179161 TCCACCGTAAACTGGATCGCGTTCACGGCCGGCTTGGTGCGCAGATAGTACATGCCCGTC 1179102 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || ||||| ||| | ||||| || ||||| | | || | || ||||| ||| Sbjct 1179101 TTCAGGCCCATCTTCCAGCCGTAGAAGTGAATCGACGTCAGCTTGCCGTAGTTCGGTTCG 1179042 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCAT 65256 ||||| || || || |||||||| |||||||||| |||| ||| || || || ||||| Sbjct 1179041 GCCACGTGAATGTTGAACGACTGGGACTGATCGATG-AACGCACCCCGGTCCGCGGCCAT 1178983 Query 65257 GTCAATGATACGACGTC-CCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | ||| ||| || ||||||||||||| || |||||||||||| || | | Sbjct 1178982 TTTGATGC-ACGTTTTCACCGATATCTCCCACACCGTCTTGTACAGGTCGCGGATGTGCT 1178924 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 ||||| ||||| || ||| | ||||| | |||| || | || ||| Sbjct 1178923 GCGGAATTTCCTCGATCCGCTGTATCGAACCGTTGTGCGCAAGGATTTGGTTCTTCATAT 1178864 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGA 65435 || ||||| || | ||| | |||| || | || || | |||| || |||| Sbjct 1178863 CGTCATCCCACAGGCCGAGTTCGGTCAGATCCTGCAGCAGATGGTGGTTGACCACCTGGA 1178804 Query 65436 ACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAG 65495 ||||||| ||||| || || || |||| ||| || ||| || || || || || Sbjct 1178803 ACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGAAGTGTACGGCTCGAACGACTCGT 1178744 Query 65496 TGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC 65555 ||||||| ||||||||||| || || || || ||||| || || | || | || || | Sbjct 1178743 TGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATCGGTGCCAGCAGGAGCGAATTCC 1178684 Query 65556 GCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGT 65615 | | || | | | |||| || | || ||| |||||||||||| ||| | | Sbjct 1178683 GGATACCATGCTTGGCAATCTTTTCCTTCAGCTCGGCCCAGTTCCACA--GGTCCGTTGG 1178626 Query 65616 CGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGA 65675 | | || | ||||| || | |||||| |||| | || |||| | || | Sbjct 1178625 GGTCTTCTCC----CACATGTCGTACTGCAGGATTCCCTTGCTCACCGGACAGCCCTCGT 1178570 Query 65676 AACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAAT 65735 | | |||||| || || ||| | | |||||| | ||| || ||| || | | Sbjct 1178569 ACGTTTCGTACGGACCGTCGCGGGCGGCCAACTCACAGCTAGCCTCCAGAGCGCCATAGT 1178510 Query 65736 AAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATAC 65795 | |||||||| || || | | || || | |||| || || || |||||||| | Sbjct 1178509 AGATGGTCTCAAAGATCTGCTGGTTCAGCTTTTGTGCTTCCTCACTTTCGTACGGATGGC 1178450 Query 65796 CCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCA 65855 ||| || | || | ||||||| || || || || |||||||| || || || |||| Sbjct 1178449 GCATGAGAATGAACGCATCGGCCATTCCCTGCACGCCGATACCGATAGGTCGGTGGCGCA 1178390 Query 65856 AATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAAT 65915 |||||||| ||||||| || || |||||||| ||||| ||||| || |||| | Sbjct 1178389 TGTTGGAACGCTTCGCCTCCGGCACCGGGTAGTAGTTGATGTCGATGATTTTGTTCAGGT 1178330 Query 65916 TGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGAT 65975 |||| || || | | ||| | || ||| ||| | || || Sbjct 1178329 TGCGCGTGACGATCTTGGCGA--CCTCC------TTCAGCTTCACGAAGT------CGTA 1178284 Query 65976 CGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTA 66035 || | | |||| | | |||||| || || |||| || || || ||||| || || | Sbjct 1178283 CGTGCGATCCGGCCTC-ACAAACATGTTCAGCGCAATCGACGCCAGATTGCACACCGCAA 1178225 Query 66036 TCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGC 66095 | ||||| | | |||||||| || || |||||||| || ||| || |||| Sbjct 1178224 TTTCGTCCTTCGACGAGTACTCGACGATCTCCGTGCACAGGTTCGAGCACTTGATCGTGC 1178165 Query 66096 CCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGC 66155 ||| ||||| || || ||||| || ||||| ||||||||||| | ||||||||| || Sbjct 1178164 CCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCTTGTAGAGCATGTACGGCACGC 1178105 Query 66156 CGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC----GTA 66211 | ||||| || || ||||| ||||| ||| ||| ||| | | ||||||||| | | Sbjct 1178104 CCGTCTCGACCTGCGACTCGATGATCGCGAACCACAGATCCTGCGCCTTCACCTGCCGGA 1178045 Query 66212 CGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCAT 66271 | |||| ||| |||| ||||| ||| || | || || ||| ||||| Sbjct 1178044 TGAACCGACCTTCCTTC----TCGTAGCCCGTGTACAGCCGCTCAAACTCTTCGCCCCAC 1177989 Query 66272 ACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCT 66331 || ||||| | || || | ||| |||||||| || ||| | | | || Sbjct 1177988 GACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGGCTCCACATTTCGTTCGCCTCC 1177929 Query 66332 ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGC 66391 || || ||| || ||||| || | ||| || |||||||| | || || || || | Sbjct 1177928 ACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGAACATGTCACGCGCACGGACC 1177869 Query 66392 TCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGG 66450 ||||| |||| ||| ||||| || ||||| |||||||| | ||| ||||||| || Sbjct 1177868 TCCTCCTTGCCAGTG-TTTTTCTTCAGATCGAGAAACTCAAACACATCGCCATGCCACGG 1177810 Query 66451 TTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC 66510 || |||||||||||||||| || ||| ||| ||| || ||||| || || || || Sbjct 1177809 CTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCCGCCCTGGTCCACATACCGGGC 1177750 Query 66511 GACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTC 66570 |||||| ||||||||| |||||| || | |||||| || | || || ||||| | Sbjct 1177749 CGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTGGAGATACCGTTCGTGCCCGC 1177690 Query 66571 GATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTT 66630 ||| | || ||||| || ||| || ||||||||||| || ||||| | ||| Sbjct 1177689 AATGTACGTACCCTTCGCCCGGATGCAGTGCACGTTCAGACCAATGCCTCCGGCGGACTT 1177630 Query 66631 CGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGAT 66690 ||||| || || | || || | | || || || || ||| || || Sbjct 1177629 GGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTCCCTCGATACTGTCGTCCGACAT 1177570 Query 66691 GGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGG 66750 || ||||| |||| || |||||||| | ||||| |||| || | ||| || Sbjct 1177569 CGTTAGGAGAAAGCAGGACGACAGTTGGGGCCGCTGCGTGGCCGCCGCAAACATGGTCGG 1177510 Query 66751 TGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAAT 66810 | |||||||||||||| | || | |||||||||| ||||| | ||||| || Sbjct 1177509 CGAGGCGTGCGTAAAGTATCGCTCCGAAAGCAAATTGTACGTTTCGATTGCCGCATCGAT 1177450 Query 66811 GTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAG 66870 || ||||| || ||||||| ||| |||||||| | || || || |||||||| | Sbjct 1177449 GTCCTCGCCGTGGATCCCGATGGCAACGCGCATCAGCATGTGCTGCGGTCGTTCGACGAT 1177390 Query 66871 CCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | ||||||| | || | |||||| ||||| || || |||| ||||| || Sbjct 1177389 CTTGCCCTTGATCTTCAGCAGGTAGGACCGTTCGAGCGTTTTGAAGCCAAAATA 1177336 >seq9254 Length=4138565 Score = 203 bits (224), Expect = 3e-47 Identities = 305/433 (70%), Gaps = 3/433 (1%) Strand=Plus/Minus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 |||||||||||||||| ||| ||||| |||||| ||| || || ||||| | || | Sbjct 2197471 TGTTCAATGCCATCGAAACGCTACCGTGTGTGAAGAAGAAGGCTGACTGGGCACTGAACT 2197412 Query 61457 GGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516 |||| | || | | || | || || || || | | || ||||| | ||||||| Sbjct 2197411 GGATTTCGAGCAAGAAAGCCAACTTCGGCGAGCGTGTTGTCGCGTTTGCCGCCGTCGAGG 2197352 Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576 | | || ||||| || |||||||| ||||| ||| | ||||| || ||||| |||| Sbjct 2197351 GAATTTTCTTCAGCGGCAGCTTTGCCGCTATCTTCTGGCTTAAGAAGCGAGGACTGATGC 2197292 Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG 61636 | || |||||||| || ||| |||| || || ||||||||| |||| ||||| |||| Sbjct 2197291 CAGGCTTGACCTTCTCGAACGAGCTGATTTCGCGTGACGAGGGCTTGCACTGTGACTTTG 2197232 Query 61637 CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGA 61696 || | | |||||| || ||||| | ||| || ||||||||| | | Sbjct 2197231 CTTGCCTTATGTTCAAA---TACCTGGTTCAAAAGCCGACGCGCGAGCGTGTGACTAGCA 2197175 Query 61697 TTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCAC 61756 | |||| || ||||| ||||||||||| || || || | || |||| ||| Sbjct 2197174 TCATTCGCGATGCGGTGGTAATCGAACAGGAGTTCCTTACCAAGGCGCTGCCAGTCGATA 2197115 Query 61757 TCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGT 61816 | | |||||||| |||| || ||||||||||| || || || ||||||||||| ||| Sbjct 2197114 TGCTGGGCATGAACTGTGACCTGATGTCGCAGTACATCGAGTTCGTTGCCGACCGGCTGC 2197055 Query 61817 TGGTCGATTTGGG 61829 ||||||| ||||| Sbjct 2197054 TGGTCGAGTTGGG 2197042 Score = 179 bits (198), Expect = 3e-40 Identities = 213/286 (74%), Gaps = 6/286 (2%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||| || || || ||||||||||| |||||||| || | || || |||||||| |||| Sbjct 2197841 AGGCCGAGGCATCTTTCTGGACGGTAGAGGAGGTAGACCTCTCGAAGGACATGAAGGACT 2197782 Query 61166 GGGAG-CGTT--TATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222 ||||| |||| | ||||| |||| || ||||| || ||| | || ||||| | Sbjct 2197781 GGGAGTCGTTGAAACCGAGC---GAACGTCACTTCATCTCGCACGTGCTCGCTTTCTTCG 2197725 Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAG 61282 |||| |||||||| |||||||| |||||| | | ||||| ||| ||||| ||||| | Sbjct 2197724 CCGCATCGGACGGAATCGTCAACGAGAATCTGGTCGAACGATTCAGCCAGGAAGTGCAGG 2197665 Query 61283 TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA 61342 || | || ||||| || ||||| || |||||||| || ||||| || |||||| |||| Sbjct 2197664 TGACCGAAGCGCGCTGCTTCTATGGTTTCCAGATCGCGATGGAAAACGTCCACAGCGAGA 2197605 Query 61343 TGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACG 61388 ||||| | || ||||| |||||||| | || | | |||||| Sbjct 2197604 TGTACTCCCTGCTGATCGACACGTACATTCGTGACCCGAAGGAACG 2197559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397521523306880