Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq9219 96.9 1e-14 seq5571 95.1 5e-14 >seq9219 Length=758374 Score = 96.9 bits (106), Expect = 1e-14 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 ||||| || || ||| | | ||||||||||| | |||||||||| | |||| || Sbjct 320053 GTCATACGGGATGGGAACCCGTGCGGGTTCATCACCATGTCGGGCGACATGCCGTAGTCG 319994 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 ||||| || | |||||| ||| || | ||| ||| |||| |||||||| ||||||||| Sbjct 319993 TTGAACGGGAGGTCCTCCTGGTCCACGATCAGCCCGGTGACACCCTTCTGCCCGTGGCGG 319934 Query 449126 CTGCAGAACTTGTCCCCCTGCTCGGGCTTGCGTGTGAAGCGCAGCACGATCTT 449178 || |||||||| || ||||||| ||| || || |||| ||||| Sbjct 319933 GAGCTAAACTTGTCACCGATCTCGGGCCGGCGCGTTTGACGGAGCAAAATCTT 319881 Score = 95.1 bits (104), Expect = 5e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 626198 ATCGAATGGGAGGACTACTTTATGATGCTGGCCCTTCTCTCGGCCCAGCGCTCCAAGGAC 626257 ||||| ||| ||| || || ||| | |||| || | | || | || ||| || Sbjct 267186 ATCGACTGGACGGAGTATTTCATGGCGATGGCTTTTTTGGCTGCGAAACGGAGCAAAGAT 267127 Query 626258 CCCAACACTCAGGTCGGGGCCTGCATCGTCAACGAGGACAAGCGCGTCGTGTCTATGGGC 626317 ||| || |||||||| ||||||||||||||||||||||| || |||||| || ||| Sbjct 267126 CCCTCGACCCAGGTCGGTGCCTGCATCGTCAACGAGGACAAACGGGTCGTGGGCATTGGC 267067 Query 626318 TACAACGGCTTCCCGCGTGGCTGCAATGACGACGTCTTTCCTTGG 626362 |||||||| || || |||||||| |||||| | || || ||| Sbjct 267066 TACAACGGGTTTCCCACTGGCTGCAGTGACGATGAATTCCCGTGG 267022 >seq5571 Length=1135 Score = 95.1 bits (104), Expect = 5e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 626251 CAAGGACCCCAACACTCAGGTCGGGGCCTGCATCGTCAACGAGGACAAGCGCGTCGTGTC 626310 ||| || ||| || |||||||| ||||||||||||||||||||||| || |||||| Sbjct 1088 CAAAGATCCCTCGACCCAGGTCGGTGCCTGCATCGTCAACGAGGACAAACGGGTCGTGGG 1029 Query 626311 TATGGGCTACAACGGCTTCCCGCGTGGCTGCAATGACGACGTCTTTCCTTGG 626362 || ||||||||||| || || |||||||| |||||| | || || ||| Sbjct 1028 CATTGGCTACAACGGGTTTCCCACTGGCTGCAGTGACGATGAATTCCCGTGG 977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084476741758416