Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq9254 113 6e-20 >seq9254 Length=4138565 Score = 113 bits (124), Expect = 6e-20 Identities = 354/546 (65%), Gaps = 2/546 (0%) Strand=Plus/Minus Query 162316 GAAATATATAACCTAGGGGCTCAGAGTCACGTTAAGGTTTCATTTGATCAGCCTGAATAC 162375 ||||| |||||||| | || || ||||| || || |||| || ||| | |||||| Sbjct 2756813 GAAATTTATAACCTGGCTGCCCAAAGTCATGTGAAAATTTCCTTCGATTTGAGCGAATAC 2756754 Query 162376 ACAGCACAGACCGACGCATTGGGCACTCTAAGGGTGCTAGAAGCCGTCCGTCTTCTTGGT 162435 || || || || || | || || || | |||| || ||| |||| | || Sbjct 2756753 ACGGCCGAGGTGGATGCGGTCGGAACACTGCGCTTGCTGGACGCCATCCGCACCGTGGGG 2756694 Query 162436 ATGGAATCATACGTAAGAATCTACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTCAG 162495 ||||| | || || ||||||| || ||| |||||||| || || | Sbjct 2756693 TTGGAAAAGTCGGTTCGATTCTACCAGGCATCCACTTCGGAGCTTTACGGCAAGGTGGTG 2756634 Query 162496 GAGACACCCCAGAAAGAAACCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAA 162555 || || || ||||| |||| || || | ||||| || || || || | ||| || Sbjct 2756633 GAAACGCCACAGAATGAAAAAACACCCTTCTATCCGCGTTCGCCGTACGCTTGTGCCAAG 2756574 Query 162556 CTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGC 162615 | || || | |||||| | | ||| ||| | ||| || ||||| ||||| | Sbjct 2756573 ATGTACGGCTACTGGATTGTGATAAATTACCGCGAAGCGTACGACATGTTTGCCTGCAAT 2756514 Query 162616 GGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATC 162675 || ||||| || || ||||| | || | ||||||| || ||||| |||||||| Sbjct 2756513 GGCATTCTTTTTAACCACGAGTCTCCGCGGCGGGGAGAGAATTTTGTCACCCGCAAGATA 2756454 Query 162676 GTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCAA-AGTGATCTACAACTTGGAAACCT 162734 ||| | || | ||| | || | || |||| | | | || || || || Sbjct 2756453 ACCCGGTCAGTGGCGAAAATCTCGCTTGGCCAGCAGGAGTGCT-TGGAGCTGGGCAATCT 2756395 Query 162735 CAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCT 162794 | || ||||||||||| || |||||||||||||| ||||| |||||| | ||| | Sbjct 2756394 TGACTCCAAGCGTGACTGGGGGCATGCCAAAGACTACGTGGAGGCCATGTGGCTAATGAT 2756335 Query 162795 TCAGCAAGAGAAGCCAGATGATTATGTGATCGCAACTGGTGAGCAGTATTCTGTAAAGGA 162854 ||||| || || || || |||| ||| ||||| ||||| ||| | | || || ||| Sbjct 2756334 GCAGCAGGACAAACCGGAAGATTTTGTCATCGCCACTGGGGAGACGCACTCGGTGCGGGA 2756275 Query 162855 CTTTGT 162860 ||||| Sbjct 2756274 GTTTGT 2756269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691376294041920