Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq18926 89.7 8e-16 seq15506 89.7 8e-16 seq10927 89.7 8e-16 seq564 89.7 8e-16 seq16200 84.2 3e-14 seq12 84.2 3e-14 seq8753 80.6 4e-13 seq22078 78.8 1e-12 seq15529 78.8 1e-12 >seq18926 Length=581 Score = 89.7 bits (98), Expect = 8e-16 Identities = 162/230 (70%), Gaps = 18/230 (8%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| |||||| || |||||||| |||| | Sbjct 387 GTACAAAGGGCAGGGACGTAATCAGCGCTAGCTA-ATGACTAGCACTTACTAGAAATT-C 330 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119 | ||| | | | | ||||| | | ||||| | | |||| |||| |||| Sbjct 329 CAGGTTCATGGGGACCG-TTGCAGTCCCCAATCCCAACTAA-ATGAGCATTTGGGTGATT 272 Query 120 ACCCGGACCTGTCGG----------CCAA--GGTGATAGACTCGTTGAATACATCAGTGT 167 |||| ||| |||| || | || || | || || || | || ||| Sbjct 271 TCCCGTTCCTCTCGGAATGGGGGCGCCTATTGGCGAGA-ACACGCTGCTGCCCACATTGT 213 Query 168 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||| ||||||| |||||||||||||||||||||||| |||||||||| || Sbjct 212 AGCACGCGTGCAGCCCAGAACATCTAAGGGCATCACGGACCTGTTATCGC 163 >seq15506 Length=664 Score = 89.7 bits (98), Expect = 8e-16 Identities = 162/230 (70%), Gaps = 18/230 (8%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| |||||| || |||||||| |||| | Sbjct 472 GTACAAAGGGCAGGGACGTAATCAGCGCTAGCTA-ATGACTAGCACTTACTAGAAATT-C 415 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119 | ||| | | | | ||||| | | ||||| | | |||| |||| |||| Sbjct 414 CAGGTTCATGGGGACCG-TTGCAGTCCCCAATCCCAACTAA-ATGAGCATTTGGGTGATT 357 Query 120 ACCCGGACCTGTCGG----------CCAA--GGTGATAGACTCGTTGAATACATCAGTGT 167 |||| ||| |||| || | || || | || || || | || ||| Sbjct 356 TCCCGTTCCTCTCGGAATGGGGGCGCCTATTGGCGAGA-ACACGCTGCTGCCCACATTGT 298 Query 168 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||| ||||||| |||||||||||||||||||||||| |||||||||| || Sbjct 297 AGCACGCGTGCAGCCCAGAACATCTAAGGGCATCACGGACCTGTTATCGC 248 >seq10927 Length=821 Score = 89.7 bits (98), Expect = 8e-16 Identities = 162/230 (70%), Gaps = 18/230 (8%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| |||||| || |||||||| |||| | Sbjct 564 GTACAAAGGGCAGGGACGTAATCAGCGCTAGCTA-ATGACTAGCACTTACTAGAAATT-C 621 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119 | ||| | | | | ||||| | | ||||| | | |||| |||| |||| Sbjct 622 CAGGTTCATGGGGACCG-TTGCAGTCCCCAATCCCAACTAA-ATGAGCATTTGGGTGATT 679 Query 120 ACCCGGACCTGTCGG----------CCAA--GGTGATAGACTCGTTGAATACATCAGTGT 167 |||| ||| |||| || | || || | || || || | || ||| Sbjct 680 TCCCGTTCCTCTCGGAATGGGGGCGCCTATTGGCGAGA-ACACGCTGCTGCCCACATTGT 738 Query 168 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||| ||||||| |||||||||||||||||||||||| |||||||||| || Sbjct 739 AGCACGCGTGCAGCCCAGAACATCTAAGGGCATCACGGACCTGTTATCGC 788 >seq564 Length=6045 Score = 89.7 bits (98), Expect = 8e-16 Identities = 162/230 (70%), Gaps = 18/230 (8%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| |||||| || |||||||| |||| | Sbjct 1539 GTACAAAGGGCAGGGACGTAATCAGCGCTAGCTA-ATGACTAGCACTTACTAGAAATT-C 1596 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119 | ||| | | | | ||||| | | ||||| | | |||| |||| |||| Sbjct 1597 CAGGTTCATGGGGACCG-TTGCAGTCCCCAATCCCAACTAA-ATGAGCATTTGGGTGATT 1654 Query 120 ACCCGGACCTGTCGG----------CCAA--GGTGATAGACTCGTTGAATACATCAGTGT 167 |||| ||| |||| || | || || | || || || | || ||| Sbjct 1655 TCCCGTTCCTCTCGGAATGGGGGCGCCTATTGGCGAGA-ACACGCTGCTGCCCACATTGT 1713 Query 168 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||| ||||||| |||||||||||||||||||||||| |||||||||| || Sbjct 1714 AGCACGCGTGCAGCCCAGAACATCTAAGGGCATCACGGACCTGTTATCGC 1763 >seq16200 Length=646 Score = 84.2 bits (92), Expect = 3e-14 Identities = 161/230 (70%), Gaps = 18/230 (8%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| |||||| || |||||||| |||| | Sbjct 383 GTACAAAGGGCAGGGACGTAATCAGCGCTAGCTA-ATGACTAGCACTTACTAGAAATT-C 326 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119 | ||| | | | | ||||| | | ||||| | | |||| |||| |||| Sbjct 325 CAGGTTCATGGGGACCG-TTGCAGTCCCCAATCCCAACTAA-ATGAGCATTTGGGTGATT 268 Query 120 ACCCGGACCTGTCGG----------CCAA--GGTGATAGACTCGTTGAATACATCAGTGT 167 |||| ||| |||| || | || || | || || || | || ||| Sbjct 267 TCCCGTTCCTCTCGGAATGGGGGCGCCTATTGGCGAGA-ACACGCTGCTGCCCACATTGT 209 Query 168 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||| ||||||| ||||||||||| |||||||||||| |||||||||| || Sbjct 208 AGCACGCGTGCAGCCCAGAACATTTAAGGGCATCACGGACCTGTTATCGC 159 >seq12 Length=3035404 Score = 84.2 bits (92), Expect = 3e-14 Identities = 161/230 (70%), Gaps = 18/230 (8%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| |||||| || |||||||| |||| | Sbjct 1603906 GTACAAAGGGCAGGGACGTAATCAGCGCTAGCTA-ATGACTAGCACTTACTAGAAATT-C 1603849 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119 | ||| | | | | ||||| | | ||||| | | | || |||| |||| Sbjct 1603848 CAGGTTCATGGGGACCG-TTGCAGTCCCCAATCCCAACTAA-AGGAGCATTTGGGTGATT 1603791 Query 120 ACCCGGACCTGTCGG----------CCAA--GGTGATAGACTCGTTGAATACATCAGTGT 167 |||| ||| |||| || | || || | || || || | || ||| Sbjct 1603790 TCCCGTTCCTCTCGGAATGGGGGCGCCTATTGGCGAGA-ACACGCTGCTGCCCACATTGT 1603732 Query 168 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||| ||||||| |||||||||||||||||||||||| |||||||||| || Sbjct 1603731 AGCACGCGTGCAGCCCAGAACATCTAAGGGCATCACGGACCTGTTATAGC 1603682 >seq8753 Length=935 Score = 80.6 bits (88), Expect = 4e-13 Identities = 160/230 (70%), Gaps = 18/230 (8%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| |||||| || |||||||| |||| | Sbjct 932 GTACAAAGGGCAGGGACGTAATCAGCGCTAGCTA-ATGACTAGCACTTACTAGAAATT-C 875 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119 | ||| | | | | ||||| | | ||||| | | |||| |||| |||| Sbjct 874 CAGGTTCATGGGGACCG-TTGCAGTCCCCAATCCCAACTAA-ATGAGCATTTGGGTGATT 817 Query 120 ACCCGGACCTGTCGG----------CCAA--GGTGATAGACTCGTTGAATACATCAGTGT 167 ||| ||| |||| || | || || | || || || | || ||| Sbjct 816 TTCCGTTCCTCTCGGAATGGGGGCGCCTATTGGCGAGA-ACACGCTGCTGCCCACATTGT 758 Query 168 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||| ||||||| | |||||||||||||||||||||| |||||||||| || Sbjct 757 AGCACGCGTGCAGTCCAGAACATCTAAGGGCATCACGGACCTGTTATCGC 708 >seq22078 Length=521 Score = 78.8 bits (86), Expect = 1e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 || |||||| ||||||| |||||||||||||||||||||||| |||||||||| || Sbjct 198 CATTGTAGCACGCGTGCAGCCCAGAACATCTAAGGGCATCACGGACCTGTTATCGC 143 >seq15529 Length=664 Score = 78.8 bits (86), Expect = 1e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 || |||||| ||||||| |||||||||||||||||||||||| |||||||||| || Sbjct 204 CATTGTAGCTCGCGTGCAGCCCAGAACATCTAAGGGCATCACGGACCTGTTATCGC 259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751829742265