Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq12215 95.1 2e-17 seq564 86.0 1e-14 seq16026 84.2 4e-14 seq18319 80.6 5e-13 seq14936 80.6 5e-13 seq2068 80.6 5e-13 seq12179 75.2 2e-11 seq6555 75.2 2e-11 >seq12215 Length=771 Score = 95.1 bits (104), Expect = 2e-17 Identities = 145/201 (72%), Gaps = 12/201 (6%) Strand=Plus/Plus Query 127 GCATGGAATAATAGAATAGGACGTGCGGT-----TCTATTTTGTTGGTTTC---TAGGAC 178 |||||||||||| ||| | ||| | |||| ||| ||| |||||||| ||| | Sbjct 385 GCATGGAATAATGGAACATGACCT-CGGTCTGAGTCT-TTTGGTTGGTTTTGTATAGACC 442 Query 179 C-GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAA 237 | | ||||||||||| || ||||| ||||| | ||||| | |||||||||| Sbjct 443 CAGAGGTAATGATTAACAGAAATAGTTGGGGGCATTGGTATTACGGCGCGAGAGGTGAAA 502 Query 238 TTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAA 297 ||| |||| | ||| |||| ||||||||||| ||| ||||| ||||||||| Sbjct 503 TTCGTGGACCGTCGTAGGACCAACTGAAGCGAAAGCGTTTGCCATGGATGCTTTCATTAA 562 Query 298 TCAGTGAACGAAAGTTAGGGG 318 ||| ||||||||||||| || Sbjct 563 TCA-AGAACGAAAGTTAGAGG 582 >seq564 Length=6045 Score = 86.0 bits (94), Expect = 1e-14 Identities = 143/201 (71%), Gaps = 12/201 (6%) Strand=Plus/Minus Query 127 GCATGGAATAATAGAATAGGACGTGCGGT-----TCTATTTTGTTGGTTTC---TAGGAC 178 |||||||||||| ||| | ||| | |||| ||| ||| |||||||| ||| | Sbjct 2446 GCATGGAATAATGGAACATGACCT-CGGTCTGAGTCT-TTTGGTTGGTTTTGTATAGACC 2389 Query 179 C-GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAA 237 | | ||||||||||| || |||| ||||| | ||||| | |||||||||| Sbjct 2388 CAGAGGTAATGATTAACAGAAGTAGTTGGGGGCATTGGTATTACGGCGCGAGAGGTGAAA 2329 Query 238 TTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAA 297 ||| | || | ||| |||| ||||||||||| ||| ||||| ||||||||| Sbjct 2328 TTCGTAGACCGTCGTAGGACCAACTGAAGCGAAAGCGTTTGCCATGGATGCTTTCATTAA 2269 Query 298 TCAGTGAACGAAAGTTAGGGG 318 ||| ||||||||||||| || Sbjct 2268 TCA-AGAACGAAAGTTAGAGG 2249 >seq16026 Length=650 Score = 84.2 bits (92), Expect = 4e-14 Identities = 142/200 (71%), Gaps = 12/200 (6%) Strand=Plus/Plus Query 128 CATGGAATAATAGAATAGGACGTGCGGT-----TCTATTTTGTTGGTTTC---TAGGACC 179 ||||||||||| ||| | ||| | |||| ||| ||| |||||||| ||| || Sbjct 163 CATGGAATAATGGAACATGACCT-CGGTCTGAGTCT-TTTGGTTGGTTTTGTATAGACCC 220 Query 180 -GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238 | ||||||||||| || |||| ||||| | ||||| || ||||||||||| Sbjct 221 AGAGGTAATGATTAACAGAAGTAGTTGGGGGCATTGGTATTACGGTGCGAGAGGTGAAAT 280 Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 || | || | ||| |||| ||||||||||| ||| ||||| |||||||||| Sbjct 281 TCGTAGACCGTCGTAGGACCAACTGAAGCGAAAGCGTTTGCCATGGATGCTTTCATTAAT 340 Query 299 CAGTGAACGAAAGTTAGGGG 318 || |||||||||| || || Sbjct 341 CA-AGAACGAAAGTAAGAGG 359 >seq18319 Length=595 Score = 80.6 bits (88), Expect = 5e-13 Identities = 139/198 (70%), Gaps = 12/198 (6%) Strand=Plus/Plus Query 127 GCATGGAATAATAGAATAGGACGTGCGGT-----TCTATTTTGTTGGTTTCTAG---GAC 178 ||||||||||| ||| | ||| | |||| ||| ||| |||||||| | ||| Sbjct 39 GCATGGAATAACGGAACATGACCT-CGGTCTGAGTCTTTTTGGTTGGTTTTTGTATAGAC 97 Query 179 C--GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAA 236 | | ||||||||||| || |||| ||||| | ||||| | ||||||||| Sbjct 98 CCAGAGGTAATGATTAACAGAAGTAGTTGGGGGCATTGGTATTACGGCGCGAGAGGTGAA 157 Query 237 ATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTA 296 |||| | || | ||| |||| ||||||||||| ||| ||||| |||||||| Sbjct 158 ATTCGTAGACCGTCGTAGGACCAACTGAAGCGAAAGCGTTTGCCATGGATGCTTTCATTA 217 Query 297 ATCAGTGAACGAAAGTTA 314 |||| |||||||||||| Sbjct 218 ATCA-AGAACGAAAGTTA 234 >seq14936 Length=679 Score = 80.6 bits (88), Expect = 5e-13 Identities = 142/201 (71%), Gaps = 12/201 (6%) Strand=Plus/Plus Query 127 GCATGGAATAATAGAATAGGACGTGCGGT-----TCTATTTTGTTGGTTTC---TAGGAC 178 |||||||||||| ||| | ||| | ||| ||| ||| |||||||| ||| | Sbjct 294 GCATGGAATAATGGAACATGACCT-CGGACTGAGTCT-TTTGGTTGGTTTTGTATAGACC 351 Query 179 C-GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAA 237 | | ||||||||||| || |||| ||||| | ||||| || |||||||||| Sbjct 352 CAGAGGTAATGATTAACAGAAGTAGTTGGGGGCATTGGTATTACGGTGCAAGAGGTGAAA 411 Query 238 TTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAA 297 ||| | || | ||| |||| ||||||||||| ||| ||||| | ||||||| Sbjct 412 TTCGTAGACCGTCGTAGGACAAACTGAAGCGAAAGCGTTTGCCATGGATGCTATCATTAA 471 Query 298 TCAGTGAACGAAAGTTAGGGG 318 ||| ||||||||||||| || Sbjct 472 TCA-AGAACGAAAGTTAGAGG 491 >seq2068 Length=2273 Score = 80.6 bits (88), Expect = 5e-13 Identities = 142/201 (71%), Gaps = 12/201 (6%) Strand=Plus/Plus Query 127 GCATGGAATAATAGAATAGGACGTGCGGT-----TCTATTTTGTTGGTTTC---TAGGAC 178 |||||||||| | ||| | ||| | |||| ||| ||| |||||||| ||| | Sbjct 296 GCATGGAATATTGGAACATGACCT-CGGTCTGAGTCT-TTTGGTTGGTTTTGTATAGACC 353 Query 179 C-GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAA 237 | | ||||||||||| || |||| ||||| | ||||| || |||||||||| Sbjct 354 CAGAGGTAATGATTAACAGAAGTAGTTGGGGGCATTGGTATTACGGCGTGAGAGGTGAAA 413 Query 238 TTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAA 297 ||| | || | ||| || | ||||||||||| ||| ||||| ||||||||| Sbjct 414 TTCGTAGACCGTCGTAGGACCAATTGAAGCGAAAGCGTTTGCCATGGATGCTTTCATTAA 473 Query 298 TCAGTGAACGAAAGTTAGGGG 318 ||| ||||||||||||| || Sbjct 474 TCA-AGAACGAAAGTTAGAGG 493 >seq12179 Length=772 Score = 75.2 bits (82), Expect = 2e-11 Identities = 99/136 (73%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 ||||||||||| || |||| ||||| | ||||| | ||||||||||||| | Sbjct 582 GTAATGATTAACAGAAGTAGTTGGGGGCATTGGTATTACGGCGCGAGAGGTGAAATTCGT 641 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 || | ||| |||| ||||||||||| ||| ||||| |||||||||||| Sbjct 642 AGACCGTCGTAGGACCAACTGAAGCGAAAGCGTTTGCCATGGATGCTTTCATTAATCA-A 700 Query 303 GAACGAAAGTTAGGGG 318 ||||||||||||| || Sbjct 701 GAACGAAAGTTAGAGG 716 >seq6555 Length=1109 Score = 75.2 bits (82), Expect = 2e-11 Identities = 99/136 (73%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 ||||||||||| || |||| ||||| | ||||| | ||||||||||||| | Sbjct 10 GTAATGATTAACAGAAGTAGTTGGGGGCATTGGTATTACGGCGCGAGAGGTGAAATTCGT 69 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 || | ||| |||| ||||||||||| ||| ||||| |||||||||||| Sbjct 70 AGACCGTCGTAGGACCAACTGAAGCGAAAGCGTTTGCCATGGATGCTTTCATTAATCA-A 128 Query 303 GAACGAAAGTTAGGGG 318 ||||||||||||| || Sbjct 129 GAACGAAAGTTAGAGG 144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914986108608