Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq14288 141 4e-31 seq4 134 6e-29 seq12229 120 1e-24 seq34 102 3e-19 seq2495 80.6 1e-12 >seq14288 Length=698 Score = 141 bits (156), Expect = 4e-31 Identities = 119/146 (82%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| | |||||| |||| ||||||||||| | ||||||||||||||| Sbjct 339 GAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGAGGTAAACTCCTTCTAAAGCTAAAT 398 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | | ||||||||||||| ||||||| |||| ||||| ||||||||||| || | Sbjct 399 ACCGCCATGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGCACTCTGAAT 458 Query 160 AGAGAGTTAAAAAGCACGTGAAATTG 185 ||||||| ||| || |||||||| || Sbjct 459 AGAGAGTCAAATAGTACGTGAAACTG 484 >seq4 Length=5098044 Score = 134 bits (148), Expect = 6e-29 Identities = 118/147 (80%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| |||||| |||| ||||||||||| | ||||||||||||||| Sbjct 839324 GAGTCGTGTTGCTTGATCGTGCAGCACTAAGTGGGAGGTAAACTCCTTCTAAAGCTAAAT 839383 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | | ||| ||||||||| ||||||| |||| ||||| ||||||||||| || | Sbjct 839384 ACCGCCACGAGCCCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGCACTCTGAAT 839443 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGT 186 ||||||| ||| || |||||||| ||| Sbjct 839444 AGAGAGTCAAATAGTACGTGAAACTGT 839470 >seq12229 Length=770 Score = 120 bits (132), Expect = 1e-24 Identities = 98/118 (83%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA-GAGGAAACTCTGGT 625 || |||||||||||||||||||||||||||| ||| |||| || | |||||| ||| | Sbjct 58 TGCGACCCGAAAGATGGTGAACTATGCCTGATCAGGCCGAAGTCAAGGGGAAACCCTGAT 117 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| || ||| ||||| ||||||||||||| |||| | ||||| |||||||||| Sbjct 118 GGAGGGCCGAAGCAATTCTGACGTGCAAATCGATTGTCAGAGTTGGGCATAGGGGCGA 175 >seq34 Length=1819477 Score = 102 bits (112), Expect = 3e-19 Identities = 91/114 (80%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 |||||||||||| ||||||||||||||| ||| | | ||| ||||| ||| ||||| Sbjct 1391954 GACCCGAAAGATAGTGAACTATGCCTGATCAGGCCAACGTCAGGAGAAACCCTGATGGAG 1391895 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | || ||| ||||| ||||||||||||| |||| | || || |||||||||| Sbjct 1391894 GGCCGAAGCTATTCTGACGTGCAAATCGATTGTCAGAGTTAGGAATAGGGGCGA 1391841 >seq2495 Length=2024 Score = 80.6 bits (88), Expect = 1e-12 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 109 AGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTA 168 |||||||||||| ||||||| |||| ||||| ||||||||||| || | ||||||| | Sbjct 1364 AGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGCACTCTGAATAGAGAGTCA 1305 Query 169 AAAAGCACGTGAAATTG 185 || || |||||||| || Sbjct 1304 AATAGTACGTGAAACTG 1288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079498692050