Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq16200 78.8 6e-13 seq18926 75.2 7e-12 seq15506 75.2 7e-12 seq14190 75.2 7e-12 seq12035 75.2 7e-12 seq10927 75.2 7e-12 seq564 75.2 7e-12 seq12 71.6 8e-11 >seq16200 Length=646 Score = 78.8 bits (86), Expect = 6e-13 Identities = 65/76 (86%), Gaps = 5/76 (7%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| || || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 421 CTCACTAA---ATATCCATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 366 Query 109 TAATACAACGCAAGCT 124 |||| || ||| |||| Sbjct 365 TAAT-CAGCGCTAGCT 351 >seq18926 Length=581 Score = 75.2 bits (82), Expect = 7e-12 Identities = 53/58 (91%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| || ||| |||| Sbjct 410 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAGCGCTAGCT 355 >seq15506 Length=664 Score = 75.2 bits (82), Expect = 7e-12 Identities = 53/58 (91%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| || ||| |||| Sbjct 495 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAGCGCTAGCT 440 >seq14190 Length=701 Score = 75.2 bits (82), Expect = 7e-12 Identities = 53/58 (91%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| || ||| |||| Sbjct 407 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAGCGCTAGCT 352 >seq12035 Length=778 Score = 75.2 bits (82), Expect = 7e-12 Identities = 53/58 (91%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| || ||| |||| Sbjct 92 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAGCGCTAGCT 147 >seq10927 Length=821 Score = 75.2 bits (82), Expect = 7e-12 Identities = 53/58 (91%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| || ||| |||| Sbjct 541 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAGCGCTAGCT 596 >seq564 Length=6045 Score = 75.2 bits (82), Expect = 7e-12 Identities = 53/58 (91%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| || ||| |||| Sbjct 1516 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAGCGCTAGCT 1571 >seq12 Length=3035404 Score = 71.6 bits (78), Expect = 8e-11 Identities = 52/58 (90%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| |||||||| || |||||||||||||||||||||||| || ||| |||| Sbjct 1603929 TCGGTAGTA-GCGACGGGTGGTGTGTACAAAGGGCAGGGACGTAAT-CAGCGCTAGCT 1603874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300734093780