Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq18926 80.6 5e-13 seq15506 80.6 5e-13 seq10927 80.6 5e-13 seq564 80.6 5e-13 seq12 80.6 5e-13 seq22078 78.8 2e-12 seq15529 78.8 2e-12 seq16200 77.0 6e-12 seq8753 75.2 2e-11 >seq18926 Length=581 Score = 80.6 bits (88), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 15/227 (7%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 || |||||||||| |||||||||||||||||||||||| ||||||| |||||| || | Sbjct 163 GCGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTGCACGCGTGCTACAATGTGGG 222 Query 174 AGCCAACGAGTTCATCACC--TTGG----------CCGGAAGGTCTGGGTAATCTTGTTA 221 || || |||| || || | || ||| ||| ||| |||| | Sbjct 223 CAGCAGCGTGTTC-TCGCCAATAGGCGCCCCCATTCCGAGAGGAACGGGAAATC-ACCCA 280 Query 222 AACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAG 281 || || | | ||||| | | | ||||| | | | | ||| ||||| |||| Sbjct 281 AATGCTCATTTAGTTGGGATTGGGGACTGCAA-CGGTCCCCATGAACCTGGAATTTCTAG 339 Query 282 TAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| || ||||| ||| ||| ||||||||||||||||||||||| Sbjct 340 TAAGTGCTAGTCATTAGCTAGCGCTGATTACGTCCCTGCCCTTTGTA 386 >seq15506 Length=664 Score = 80.6 bits (88), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 15/227 (7%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 || |||||||||| |||||||||||||||||||||||| ||||||| |||||| || | Sbjct 248 GCGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTGCACGCGTGCTACAATGTGGG 307 Query 174 AGCCAACGAGTTCATCACC--TTGG----------CCGGAAGGTCTGGGTAATCTTGTTA 221 || || |||| || || | || ||| ||| ||| |||| | Sbjct 308 CAGCAGCGTGTTC-TCGCCAATAGGCGCCCCCATTCCGAGAGGAACGGGAAATC-ACCCA 365 Query 222 AACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAG 281 || || | | ||||| | | | ||||| | | | | ||| ||||| |||| Sbjct 366 AATGCTCATTTAGTTGGGATTGGGGACTGCAA-CGGTCCCCATGAACCTGGAATTTCTAG 424 Query 282 TAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| || ||||| ||| ||| ||||||||||||||||||||||| Sbjct 425 TAAGTGCTAGTCATTAGCTAGCGCTGATTACGTCCCTGCCCTTTGTA 471 >seq10927 Length=821 Score = 80.6 bits (88), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 15/227 (7%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 || |||||||||| |||||||||||||||||||||||| ||||||| |||||| || | Sbjct 788 GCGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTGCACGCGTGCTACAATGTGGG 729 Query 174 AGCCAACGAGTTCATCACC--TTGG----------CCGGAAGGTCTGGGTAATCTTGTTA 221 || || |||| || || | || ||| ||| ||| |||| | Sbjct 728 CAGCAGCGTGTTC-TCGCCAATAGGCGCCCCCATTCCGAGAGGAACGGGAAATC-ACCCA 671 Query 222 AACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAG 281 || || | | ||||| | | | ||||| | | | | ||| ||||| |||| Sbjct 670 AATGCTCATTTAGTTGGGATTGGGGACTGCAA-CGGTCCCCATGAACCTGGAATTTCTAG 612 Query 282 TAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| || ||||| ||| ||| ||||||||||||||||||||||| Sbjct 611 TAAGTGCTAGTCATTAGCTAGCGCTGATTACGTCCCTGCCCTTTGTA 565 >seq564 Length=6045 Score = 80.6 bits (88), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 15/227 (7%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 || |||||||||| |||||||||||||||||||||||| ||||||| |||||| || | Sbjct 1763 GCGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTGCACGCGTGCTACAATGTGGG 1704 Query 174 AGCCAACGAGTTCATCACC--TTGG----------CCGGAAGGTCTGGGTAATCTTGTTA 221 || || |||| || || | || ||| ||| ||| |||| | Sbjct 1703 CAGCAGCGTGTTC-TCGCCAATAGGCGCCCCCATTCCGAGAGGAACGGGAAATC-ACCCA 1646 Query 222 AACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAG 281 || || | | ||||| | | | ||||| | | | | ||| ||||| |||| Sbjct 1645 AATGCTCATTTAGTTGGGATTGGGGACTGCAA-CGGTCCCCATGAACCTGGAATTTCTAG 1587 Query 282 TAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| || ||||| ||| ||| ||||||||||||||||||||||| Sbjct 1586 TAAGTGCTAGTCATTAGCTAGCGCTGATTACGTCCCTGCCCTTTGTA 1540 >seq12 Length=3035404 Score = 80.6 bits (88), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 15/227 (7%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 || |||||||||| |||||||||||||||||||||||| ||||||| |||||| || | Sbjct 1603682 GCTATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTGCACGCGTGCTACAATGTGGG 1603741 Query 174 AGCCAACGAGTTCATCACC--TTGG----------CCGGAAGGTCTGGGTAATCTTGTTA 221 || || |||| || || | || ||| ||| ||| |||| | Sbjct 1603742 CAGCAGCGTGTTC-TCGCCAATAGGCGCCCCCATTCCGAGAGGAACGGGAAATC-ACCCA 1603799 Query 222 AACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAG 281 || || | | ||||| | | | ||||| | | | | ||| ||||| |||| Sbjct 1603800 AATGCTCCTTTAGTTGGGATTGGGGACTGCAA-CGGTCCCCATGAACCTGGAATTTCTAG 1603858 Query 282 TAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| || ||||| ||| ||| ||||||||||||||||||||||| Sbjct 1603859 TAAGTGCTAGTCATTAGCTAGCGCTGATTACGTCCCTGCCCTTTGTA 1603905 >seq22078 Length=521 Score = 78.8 bits (86), Expect = 2e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169 || |||||||||| |||||||||||||||||||||||| ||||||| |||||| || Sbjct 143 GCGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTGCACGCGTGCTACAATG 198 >seq15529 Length=664 Score = 78.8 bits (86), Expect = 2e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169 || |||||||||| |||||||||||||||||||||||| ||||||| |||||| || Sbjct 259 GCGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTGCACGCGAGCTACAATG 204 >seq16200 Length=646 Score = 77.0 bits (84), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 15/227 (7%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 || |||||||||| |||||||||||| ||||||||||| ||||||| |||||| || | Sbjct 159 GCGATAACAGGTCCGTGATGCCCTTAAATGTTCTGGGCTGCACGCGTGCTACAATGTGGG 218 Query 174 AGCCAACGAGTTCATCACC--TTGG----------CCGGAAGGTCTGGGTAATCTTGTTA 221 || || |||| || || | || ||| ||| ||| |||| | Sbjct 219 CAGCAGCGTGTTC-TCGCCAATAGGCGCCCCCATTCCGAGAGGAACGGGAAATC-ACCCA 276 Query 222 AACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAG 281 || || | | ||||| | | | ||||| | | | | ||| ||||| |||| Sbjct 277 AATGCTCATTTAGTTGGGATTGGGGACTGCAA-CGGTCCCCATGAACCTGGAATTTCTAG 335 Query 282 TAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| || ||||| ||| ||| ||||||||||||||||||||||| Sbjct 336 TAAGTGCTAGTCATTAGCTAGCGCTGATTACGTCCCTGCCCTTTGTA 382 >seq8753 Length=935 Score = 75.2 bits (82), Expect = 2e-11 Identities = 50/56 (89%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169 || |||||||||| |||||||||||||||||||||| | ||||||| |||||| || Sbjct 708 GCGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGACTGCACGCGTGCTACAATG 763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946978629888