Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq17833 432 1e-118 seq213 430 4e-118 seq9059 152 2e-34 >seq17833 Length=603 Score = 432 bits (478), Expect = 1e-118 Identities = 274/297 (92%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||| ||| || |||||| | || | |||| | | |||||||||||||||||| Sbjct 8 CTCCCACCTATGCTGCACCTCCTATATCGCCTTACAATGCCAGACTAGAGTCAAGCTCAA 67 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||| | | ||||||||||||||||||||||||||||||||| Sbjct 68 CAGGGTCTTCTTTCCCCGCTAGTGCTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 127 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 128 ATAGTAGATAGGGACAGAGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 187 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 188 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGC 247 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct 248 TTGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 304 >seq213 Length=48454 Score = 430 bits (476), Expect = 4e-118 Identities = 309/356 (87%), Gaps = 10/356 (3%) Strand=Plus/Plus Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC-------CGAAACGG---C 237 ||||||| ||| |||| || ||||||| ||| ||| ||| |||| | Sbjct 4852 TAAGTAAGGCAACAGTAAGAGTGGTGGTATCTCAGAGGCGGGTCCGCACGAGACGGGCCC 4911 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 |||||| ||| || |||||| | || | |||| | | ||||||||||||||||||| Sbjct 4912 TCCCACCTATGCTGCACCTCCTATATCGCCTTACAATGCCAGACTAGAGTCAAGCTCAAC 4971 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||| | | |||||||||||||||||||||||||||||||||| Sbjct 4972 AGGGTCTTCTTTCCCCGCTAGTGCTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 5031 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 5032 TAGTAGATAGGGACAGAGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 5091 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 5092 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCT 5151 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||| |||||||||||||||||||||||||||||||| | ||||||| Sbjct 5152 TGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATGGTGTCAACA 5207 >seq9059 Length=917 Score = 152 bits (168), Expect = 2e-34 Identities = 90/94 (96%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 440 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATT 499 |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct 917 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTTGACATT 858 Query 500 CAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||| |||||||||||||||||| ||||||| Sbjct 857 CAGAGCATTGGGCAGAAATCACATTGTGTCAACA 824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634817837408