Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq59 459 2e-124
seq24 239 4e-58
>seq59
Length=1145648
Score = 459 bits (508), Expect = 2e-124
Identities = 1223/1849 (66%), Gaps = 45/1849 (2%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
|| ||||| |||||||||||||| | |||| || || | |||||||||||||| ||
Sbjct 140739 TCCACCGTAAACTGGATCGCATTTACGGCCGGTTTTGTTCGCAGATAGTACATGCCCGTT 140798
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197
|| || || ||| | || || || ||||||| | || |||| ||||| |||
Sbjct 140799 TTCAGTCCCATTTTCCAGCCGTAAAAGTGGATCGATGTCAGCTTGCCATAGTTCGGTTCG 140858
Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCAT 65256
||||| || || || ||||| || ||||||||| |||| ||| || || ||||||||
Sbjct 140859 GCCACGTGTATGTTGAACGATTGCGACTGATCGATA-AACGCACCCCGGTCAGCAGCCAT 140917
Query 65257 GTCAATGATACGACGTC-CCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315
| |||| ||| | |||| |||||||| || || |||||||| |||| ||
Sbjct 140918 CTTAATGC-ACGTTTTAACCGAAATCTCCCACACCGTTTTGTACAGATCGCGTATTTCCT 140976
Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGT--GCAATAATGCGATTACGCAT 65373
| || ||| || ||| || | || || | || | | ||| | || |||
Sbjct 140977 TCGGTATCGATTCGATGCTTTGAATCGATCC--GTTGTTGGACAGAATTTGGTTCTTCAT 141034
Query 65374 CGACTCTGA--CCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACT 65431
| || || ||||| ||||| | | | || ||| | || || | || | ||
Sbjct 141035 -GTCTA-GATCCCACAGACCCATCGCTGTCAAATCTTGCAGCAGATGGTGGTTCACCACC 141092
Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491
|| ||||||||||| |||||||| || || | |||||||||| ||||| |||||
Sbjct 141093 TGAAACTCGCCGGAAAGTACACGCCGATTGTAAACGTTGGACGTGTACGGTTCGAAGGAC 141152
Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551
|| |||| || | ||||| || || || || || ||||| || || | || || ||
Sbjct 141153 TCGTTGTTACCCAAGATTTGTGCCGTCGAAGCGGTAGGCATCGGTGCCAACAGCAGCGAA 141212
Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611
|| || | |||| | || |||| || | ||| ||| |||| ||||| | |
Sbjct 141213 TTGCGGATGCCGTGCTTTGCAATTTTTTCCTTCAACTCGGCCCAATTCCAAAG------A 141266
Query 65612 TCGTCGACA--TCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669
|| |||| ||| |||||| || | |||||| | || | || |||| |
Sbjct 141267 TC--CGACGGTTCCTTCTTCCACATTTCGTACTGCAGGATGCCTTTGCTTACCGGACTCC 141324
Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGG 65729
| | | | |||||| ||| || ||| | | |||||| | || | |||
Sbjct 141325 CTTCGTACGTTTCGTACGGTCCGTCGCGGGCGGCCAACTCACAGCTCGCTTCCAATGCTC 141384
Query 65730 CAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACG 65789
| | || || || |||||||| || | || || | | ||||| ||||| |||||||
Sbjct 141385 CGTAGTAGATTGTTTCGAAAATTTGTTGGTTCAGCTTTTGGGCCTCCTCGCTTTCGTACG 141444
Query 65790 GCATACC-CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGA 65848
| ||| | ||||| | || | ||||||| || ||||| || |||||||| || |
Sbjct 141445 G-ATAGCGCATCAAAATGAACGCATCGGCCATGCCCTGAACACCGATACCGATCGGCCTG 141503
Query 65849 TGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908
|| |||| ||||| || ||||||| ||||| || ||||| || |||||||||||
Sbjct 141504 TGCCGCATGTTGGAGCGCTTCGCCTCCGGTACTGGATAGTAGTTTATATCGATAATTTTG 141563
Query 65909 TTCAAATTGCGTGTCACCACATGCACGATA--CGTC-GCAATTGTTCGAAATCAAAATGT 65965
|||| |||||| |||| | | | ||| | | || || ||| | || || | ||
Sbjct 141564 TTCAGATTGCGCGTCAAAATCTTCGCGACATCCTTCAGC--TTGG-CAAAGTCGTAC-GT 141619
Query 65966 TTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTG 66025
|| | || || | ||||||| || || || | || || | |||
Sbjct 141620 TTTG-----TCCGGTTT---------CACAAACATGTTCAGCGCGATCGAGGCCAAATTG 141665
Query 66026 CAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAG 66085
|| || ||||| || || | | ||||| || || ||||| |||||||| ||
Sbjct 141666 CACACCGCTATTTCATCCTTCGACGAGTACTCCACTATCTCGGTACACAGATTGGAACAC 141725
Query 66086 CGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATG 66145
||||||||| | ||||| ||||| |||||||| ||||| ||||||||||||| ||||
Sbjct 141726 TTTATGGTGCCGATGTTCTGCTGATTGCTCTTGCGGTTGCACGCATCCTTGTACAGCATG 141785
Query 66146 TACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTC 66205
|||||| ||| || || || || || || |||||||| ||| || | ||||||||
Sbjct 141786 TACGGAACGCCCGTTTCCACCTGCGATTCGATGATGGCAAACCATAGGTCCTGTGCCTTC 141845
Query 66206 ACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCA 66265
||| |||| | ||| | | ||||| ||| || | ||||| |||
Sbjct 141846 ACCTGGCGTATAAATCGACCCTCCTGCTCGTACCCAGTGTACAGCTTCTCGAACTCTTCG 141905
Query 66266 CCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCC 66325
||||| || | || | || || | |||||| |||||||| ||| | | |
Sbjct 141906 CCCCAAGTGTCAGCCAATCCGGGGCAGTCGTGTGGGCACATCAGGCTCCACATTTCGTTC 141965
Query 66326 TGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCT 66385
|| ||||| |||| || ||||| || ||||| ||||||||||| | ||||| ||
Sbjct 141966 GCCTCCACACGCTGCATGAACAGATCCGGGATCCACAGGGCGTAGAACATGTCGCGGGCA 142025
Query 66386 CGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGC 66445
|| |||||| ||||| ||||| || || || ||||| || || || | |||
Sbjct 142026 CGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCGAATATATCCCCGTGC 142085
Query 66446 CATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAG 66505
|||||||| ||||||||||| || | ||| || ||| |||||| || || |||||
Sbjct 142086 CATGGTTCGAGGTAGATGGCAAAGGCGCCGGGCCGCTTGTTGCCACCCTGATCCACGTAC 142145
Query 66506 CGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTG 66565
|| || |||||| | || |||| |||||| || | |||||| || | ||||| |||
Sbjct 142146 CGGGCCGTGTTGTTGTAAACGCGCAGCATCGGCACCAACCCGTTCGAAATCCCATTCGTG 142205
Query 66566 CCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCC 66625
||| |||| | |||| || || || ||| || ||||| || ||||| ||||||
Sbjct 142206 CCGGAGATGTACGTTCCTTTGGCGCGAATGCAGTGCACGTTCAGCCCGATACCGCCGGCC 142265
Query 66626 GTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCC 66685
| || || || ||||| | | || | | || || ||||| ||| ||
Sbjct 142266 GATTTGGAAATCAGTGCACACTGCTTTAGCGTATCGTAAATACCCTCAATACTGTCGTCC 142325
Query 66686 TTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGG 66745
||||| || || |||| || ||| || || | || ||||||| || | |
Sbjct 142326 GACATGGTAAGCAGAAAGCAAGACGAAAGCTGCGGACGCTGCGTAGCGGCCGCAAACATG 142385
Query 66746 GTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCA 66805
|| |||| || || |||||||| | || | |||||||||||||||| |||||
Sbjct 142386 GTCGGTGAGGCATGGGTAAAGTAGCGCTCGGAAAGCAGATTGTACGTCTCGATGGCAGCA 142445
Query 66806 TCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCG 66865
||||||| ||| || ||||| |||| ||| |||||||| | || ||| || || ||
Sbjct 142446 TCAATGTCTTCACCGTGAATACCGATGGCAACGCGCATCAGCATGTGTTGCGGTCGCTCC 142505
Query 66866 ACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914
|| | | | ||||||| | || || ||||| || ||||| || ||||
Sbjct 142506 ACAATCTTACCCTTGATCTTCAGCAAATAGGAACGCTCCAGTGTTTTGA 142554
>seq24
Length=2206587
Score = 239 bits (264), Expect = 4e-58
Identities = 313/433 (72%), Gaps = 3/433 (1%)
Strand=Plus/Minus
Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456
|||| ||||||||||| ||| ||||| |||||| ||| || || ||||| | || |
Sbjct 1947814 TGTTTAATGCCATCGAAACGCTACCGTGCGTGAAGAAGAAGGCAGACTGGGCGCTTAACT 1947755
Query 61457 GGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516
||||| | || | | ||||| ||||| || || || | |||||||| | |||||||
Sbjct 1947754 GGATCTCGAGCAAGAAGGCTAACTTTGGCGAGCGTGTGGTCGCATTTGCTGCCGTCGAGG 1947695
Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576
|| | || ||||| || ||||| | ||||| ||| | ||||| ||||| |||||||
Sbjct 1947694 GTATCTTCTTCAGCGGCAGCTTTGCGTCCATCTTCTGGCTCAAGAAGCGTGGCCTTATGC 1947635
Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG 61636
| ||||| |||||| || ||| |||| || | |||||||| ||||||||||||| |
Sbjct 1947634 CGGGTCTTACCTTCTCGAACGAGCTGATTTCGAGGGACGAGGGATTGCATTGTGATTTCG 1947575
Query 61637 CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGA 61696
| || | ||||| ||||||||| | || ||| ||||||| ||| ||||
Sbjct 1947574 CCTGCCTGATGTTCAA---GTATCTGGTGCAGAAGCCTTCGAAGGAGCGCGTGACGGAGA 1947518
Query 61697 TTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCAC 61756
| | || || |||||| ||||| || |||||| |||| | || |||| |||
Sbjct 1947517 TCATCCGCGATGCGGTAGTGATCGAGCAAGAATTTTTGACGAAAGCCCTGCCGGTCGATA 1947458
Query 61757 TCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGT 61816
| ||||||||||||||| || ||||||||||| ||||| ||||| || || ||| ||
Sbjct 1947457 TGCTCGGCATGAATTGTGATCTGATGTCGCAGTACATTGAGTTTGTGGCGGATCGTTTGC 1947398
Query 61817 TGGTCGATTTGGG 61829
|| | || |||||
Sbjct 1947397 TGCTGGAGTTGGG 1947385
Score = 203 bits (224), Expect = 3e-47
Identities = 208/269 (77%), Gaps = 6/269 (2%)
Strand=Plus/Minus
Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165
|||| ||||| || |||||||| ||||| ||||| || | || || |||||||| ||||
Sbjct 1948190 AGGCTGAAGCATCGTTCTGGACCGTGGAAGAGGTAGACCTATCGAAGGACATGAAGGACT 1948131
Query 61166 GGGAG-CGTTTAT--CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222
|||| || | | |||||| ||| ||||| || || ||| |||| |||||||
Sbjct 1948130 GGGACTCGCTAAAACCGAGCG---AACGTCATTTTATCTCGCACGTGCTGGCCTTCTTTG 1948074
Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAG 61282
|||| || ||||||||||| || |||||| | | ||||| ||| ||||||||||| |
Sbjct 1948073 CCGCGTCCGACGGTATCGTGAACGAGAATCTGGTCGAACGGTTCAGCCAGGAGGTGCAGG 1948014
Query 61283 TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA 61342
| |||||||||| || |||||||||||||||||||| |||||||| |||||| ||||
Sbjct 1948013 TAACGGAGGCGCGCTGCTTCTACGGCTTCCAGATTGCGATGGAGAACGTCCACAGTGAGA 1947954
Query 61343 TGTACAGTGTTCTCATCGATACGTACATC 61371
||||| | || ||||| |||||||||
Sbjct 1947953 TGTACTCGCTGCTGATCGACACGTACATC 1947925
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397454759091440
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