Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq59 459 2e-124 seq24 239 4e-58 >seq59 Length=1145648 Score = 459 bits (508), Expect = 2e-124 Identities = 1223/1849 (66%), Gaps = 45/1849 (2%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || ||||| |||||||||||||| | |||| || || | |||||||||||||| || Sbjct 140739 TCCACCGTAAACTGGATCGCATTTACGGCCGGTTTTGTTCGCAGATAGTACATGCCCGTT 140798 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || || || ||| | || || || ||||||| | || |||| ||||| ||| Sbjct 140799 TTCAGTCCCATTTTCCAGCCGTAAAAGTGGATCGATGTCAGCTTGCCATAGTTCGGTTCG 140858 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCAT 65256 ||||| || || || ||||| || ||||||||| |||| ||| || || |||||||| Sbjct 140859 GCCACGTGTATGTTGAACGATTGCGACTGATCGATA-AACGCACCCCGGTCAGCAGCCAT 140917 Query 65257 GTCAATGATACGACGTC-CCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | |||| ||| | |||| |||||||| || || |||||||| |||| || Sbjct 140918 CTTAATGC-ACGTTTTAACCGAAATCTCCCACACCGTTTTGTACAGATCGCGTATTTCCT 140976 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGT--GCAATAATGCGATTACGCAT 65373 | || ||| || ||| || | || || | || | | ||| | || ||| Sbjct 140977 TCGGTATCGATTCGATGCTTTGAATCGATCC--GTTGTTGGACAGAATTTGGTTCTTCAT 141034 Query 65374 CGACTCTGA--CCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACT 65431 | || || ||||| ||||| | | | || ||| | || || | || | || Sbjct 141035 -GTCTA-GATCCCACAGACCCATCGCTGTCAAATCTTGCAGCAGATGGTGGTTCACCACC 141092 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 || ||||||||||| |||||||| || || | |||||||||| ||||| ||||| Sbjct 141093 TGAAACTCGCCGGAAAGTACACGCCGATTGTAAACGTTGGACGTGTACGGTTCGAAGGAC 141152 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || |||| || | ||||| || || || || || ||||| || || | || || || Sbjct 141153 TCGTTGTTACCCAAGATTTGTGCCGTCGAAGCGGTAGGCATCGGTGCCAACAGCAGCGAA 141212 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611 || || | |||| | || |||| || | ||| ||| |||| ||||| | | Sbjct 141213 TTGCGGATGCCGTGCTTTGCAATTTTTTCCTTCAACTCGGCCCAATTCCAAAG------A 141266 Query 65612 TCGTCGACA--TCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669 || |||| ||| |||||| || | |||||| | || | || |||| | Sbjct 141267 TC--CGACGGTTCCTTCTTCCACATTTCGTACTGCAGGATGCCTTTGCTTACCGGACTCC 141324 Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGG 65729 | | | | |||||| ||| || ||| | | |||||| | || | ||| Sbjct 141325 CTTCGTACGTTTCGTACGGTCCGTCGCGGGCGGCCAACTCACAGCTCGCTTCCAATGCTC 141384 Query 65730 CAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACG 65789 | | || || || |||||||| || | || || | | ||||| ||||| ||||||| Sbjct 141385 CGTAGTAGATTGTTTCGAAAATTTGTTGGTTCAGCTTTTGGGCCTCCTCGCTTTCGTACG 141444 Query 65790 GCATACC-CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGA 65848 | ||| | ||||| | || | ||||||| || ||||| || |||||||| || | Sbjct 141445 G-ATAGCGCATCAAAATGAACGCATCGGCCATGCCCTGAACACCGATACCGATCGGCCTG 141503 Query 65849 TGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908 || |||| ||||| || ||||||| ||||| || ||||| || ||||||||||| Sbjct 141504 TGCCGCATGTTGGAGCGCTTCGCCTCCGGTACTGGATAGTAGTTTATATCGATAATTTTG 141563 Query 65909 TTCAAATTGCGTGTCACCACATGCACGATA--CGTC-GCAATTGTTCGAAATCAAAATGT 65965 |||| |||||| |||| | | | ||| | | || || ||| | || || | || Sbjct 141564 TTCAGATTGCGCGTCAAAATCTTCGCGACATCCTTCAGC--TTGG-CAAAGTCGTAC-GT 141619 Query 65966 TTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTG 66025 || | || || | ||||||| || || || | || || | ||| Sbjct 141620 TTTG-----TCCGGTTT---------CACAAACATGTTCAGCGCGATCGAGGCCAAATTG 141665 Query 66026 CAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAG 66085 || || ||||| || || | | ||||| || || ||||| |||||||| || Sbjct 141666 CACACCGCTATTTCATCCTTCGACGAGTACTCCACTATCTCGGTACACAGATTGGAACAC 141725 Query 66086 CGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATG 66145 ||||||||| | ||||| ||||| |||||||| ||||| ||||||||||||| |||| Sbjct 141726 TTTATGGTGCCGATGTTCTGCTGATTGCTCTTGCGGTTGCACGCATCCTTGTACAGCATG 141785 Query 66146 TACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTC 66205 |||||| ||| || || || || || || |||||||| ||| || | |||||||| Sbjct 141786 TACGGAACGCCCGTTTCCACCTGCGATTCGATGATGGCAAACCATAGGTCCTGTGCCTTC 141845 Query 66206 ACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCA 66265 ||| |||| | ||| | | ||||| ||| || | ||||| ||| Sbjct 141846 ACCTGGCGTATAAATCGACCCTCCTGCTCGTACCCAGTGTACAGCTTCTCGAACTCTTCG 141905 Query 66266 CCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCC 66325 ||||| || | || | || || | |||||| |||||||| ||| | | | Sbjct 141906 CCCCAAGTGTCAGCCAATCCGGGGCAGTCGTGTGGGCACATCAGGCTCCACATTTCGTTC 141965 Query 66326 TGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCT 66385 || ||||| |||| || ||||| || ||||| ||||||||||| | ||||| || Sbjct 141966 GCCTCCACACGCTGCATGAACAGATCCGGGATCCACAGGGCGTAGAACATGTCGCGGGCA 142025 Query 66386 CGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGC 66445 || |||||| ||||| ||||| || || || ||||| || || || | ||| Sbjct 142026 CGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCGAATATATCCCCGTGC 142085 Query 66446 CATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAG 66505 |||||||| ||||||||||| || | ||| || ||| |||||| || || ||||| Sbjct 142086 CATGGTTCGAGGTAGATGGCAAAGGCGCCGGGCCGCTTGTTGCCACCCTGATCCACGTAC 142145 Query 66506 CGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTG 66565 || || |||||| | || |||| |||||| || | |||||| || | ||||| ||| Sbjct 142146 CGGGCCGTGTTGTTGTAAACGCGCAGCATCGGCACCAACCCGTTCGAAATCCCATTCGTG 142205 Query 66566 CCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCC 66625 ||| |||| | |||| || || || ||| || ||||| || ||||| |||||| Sbjct 142206 CCGGAGATGTACGTTCCTTTGGCGCGAATGCAGTGCACGTTCAGCCCGATACCGCCGGCC 142265 Query 66626 GTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCC 66685 | || || || ||||| | | || | | || || ||||| ||| || Sbjct 142266 GATTTGGAAATCAGTGCACACTGCTTTAGCGTATCGTAAATACCCTCAATACTGTCGTCC 142325 Query 66686 TTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGG 66745 ||||| || || |||| || ||| || || | || ||||||| || | | Sbjct 142326 GACATGGTAAGCAGAAAGCAAGACGAAAGCTGCGGACGCTGCGTAGCGGCCGCAAACATG 142385 Query 66746 GTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCA 66805 || |||| || || |||||||| | || | |||||||||||||||| ||||| Sbjct 142386 GTCGGTGAGGCATGGGTAAAGTAGCGCTCGGAAAGCAGATTGTACGTCTCGATGGCAGCA 142445 Query 66806 TCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCG 66865 ||||||| ||| || ||||| |||| ||| |||||||| | || ||| || || || Sbjct 142446 TCAATGTCTTCACCGTGAATACCGATGGCAACGCGCATCAGCATGTGTTGCGGTCGCTCC 142505 Query 66866 ACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914 || | | | ||||||| | || || ||||| || ||||| || |||| Sbjct 142506 ACAATCTTACCCTTGATCTTCAGCAAATAGGAACGCTCCAGTGTTTTGA 142554 >seq24 Length=2206587 Score = 239 bits (264), Expect = 4e-58 Identities = 313/433 (72%), Gaps = 3/433 (1%) Strand=Plus/Minus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 |||| ||||||||||| ||| ||||| |||||| ||| || || ||||| | || | Sbjct 1947814 TGTTTAATGCCATCGAAACGCTACCGTGCGTGAAGAAGAAGGCAGACTGGGCGCTTAACT 1947755 Query 61457 GGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516 ||||| | || | | ||||| ||||| || || || | |||||||| | ||||||| Sbjct 1947754 GGATCTCGAGCAAGAAGGCTAACTTTGGCGAGCGTGTGGTCGCATTTGCTGCCGTCGAGG 1947695 Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576 || | || ||||| || ||||| | ||||| ||| | ||||| ||||| ||||||| Sbjct 1947694 GTATCTTCTTCAGCGGCAGCTTTGCGTCCATCTTCTGGCTCAAGAAGCGTGGCCTTATGC 1947635 Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG 61636 | ||||| |||||| || ||| |||| || | |||||||| ||||||||||||| | Sbjct 1947634 CGGGTCTTACCTTCTCGAACGAGCTGATTTCGAGGGACGAGGGATTGCATTGTGATTTCG 1947575 Query 61637 CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGA 61696 | || | ||||| ||||||||| | || ||| ||||||| ||| |||| Sbjct 1947574 CCTGCCTGATGTTCAA---GTATCTGGTGCAGAAGCCTTCGAAGGAGCGCGTGACGGAGA 1947518 Query 61697 TTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCAC 61756 | | || || |||||| ||||| || |||||| |||| | || |||| ||| Sbjct 1947517 TCATCCGCGATGCGGTAGTGATCGAGCAAGAATTTTTGACGAAAGCCCTGCCGGTCGATA 1947458 Query 61757 TCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGT 61816 | ||||||||||||||| || ||||||||||| ||||| ||||| || || ||| || Sbjct 1947457 TGCTCGGCATGAATTGTGATCTGATGTCGCAGTACATTGAGTTTGTGGCGGATCGTTTGC 1947398 Query 61817 TGGTCGATTTGGG 61829 || | || ||||| Sbjct 1947397 TGCTGGAGTTGGG 1947385 Score = 203 bits (224), Expect = 3e-47 Identities = 208/269 (77%), Gaps = 6/269 (2%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||| ||||| || |||||||| ||||| ||||| || | || || |||||||| |||| Sbjct 1948190 AGGCTGAAGCATCGTTCTGGACCGTGGAAGAGGTAGACCTATCGAAGGACATGAAGGACT 1948131 Query 61166 GGGAG-CGTTTAT--CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222 |||| || | | |||||| ||| ||||| || || ||| |||| ||||||| Sbjct 1948130 GGGACTCGCTAAAACCGAGCG---AACGTCATTTTATCTCGCACGTGCTGGCCTTCTTTG 1948074 Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAG 61282 |||| || ||||||||||| || |||||| | | ||||| ||| ||||||||||| | Sbjct 1948073 CCGCGTCCGACGGTATCGTGAACGAGAATCTGGTCGAACGGTTCAGCCAGGAGGTGCAGG 1948014 Query 61283 TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA 61342 | |||||||||| || |||||||||||||||||||| |||||||| |||||| |||| Sbjct 1948013 TAACGGAGGCGCGCTGCTTCTACGGCTTCCAGATTGCGATGGAGAACGTCCACAGTGAGA 1947954 Query 61343 TGTACAGTGTTCTCATCGATACGTACATC 61371 ||||| | || ||||| ||||||||| Sbjct 1947953 TGTACTCGCTGCTGATCGACACGTACATC 1947925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397454759091440