Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq98 87.8 7e-12 >seq98 Length=564575 Score = 87.8 bits (96), Expect = 7e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 626197 CATCGAATGGGAGGACTACTTTATGATGCTGGCCCTTCTCTCGGCCCAGCGCTCCAAGGA 626256 |||||| ||| ||| ||||| ||| |||| | || | ||| |||| ||| || Sbjct 4937 CATCGACTGGACGGAATACTTCATGGCAATGGCATTCCTGGCCGCCAAGCGTAGCAAAGA 4996 Query 626257 CCCCAACACTCAGGTCGGGGCCTGCATCGTCAACGAGGACAAGCGCGTCGTGTCTATGGG 626316 ||| || |||||||| || |||||||| ||||||||||| ||||| || || || Sbjct 4997 CCCGTCGACCCAGGTCGGTGCGTGCATCGTGAACGAGGACAAACGCGTGGTTGGCATCGG 5056 Query 626317 CTACAACGGCTTCCCGCGTGGCTGCAATGACGACGTCTTTCCTTGG 626362 |||||||| ||||| || |||| |||||||| || || ||| Sbjct 5057 GTACAACGGGTTCCCTACCGGGTGCAGTGACGACGAGTTCCCGTGG 5102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084099717977058