Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq497 181 2e-43 seq297 122 1e-25 seq208 89.7 9e-16 seq6 89.7 9e-16 seq7275 86.0 1e-14 seq3553 84.2 4e-14 seq21 80.6 5e-13 seq1124 78.8 2e-12 >seq497 Length=263497 Score = 181 bits (200), Expect = 2e-43 Identities = 139/163 (85%), Gaps = 4/163 (2%) Strand=Plus/Minus Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| ||||| |||||||||||||||||| ||||||||||| ||||||||| Sbjct 30550 AATTCTGCTTCGCAATGATTGGAAGAGCCGACATCGAAAGATCAAAAAGCGACGTCGCTA 30491 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| |||| ||| |||||||||||||||||||||||||| ||||||| || Sbjct 30490 TGAACGCTTGGCCGCCATAAGTCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 30431 Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| ||| | | | |||||||||||||||| ||||| Sbjct 30430 GAAAACTCTTCAA--GCCAAAAGGATCGATAGGCCGTCCTTTC 30390 >seq297 Length=483352 Score = 122 bits (134), Expect = 1e-25 Identities = 93/108 (86%), Gaps = 4/108 (4%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||||| |||||||||||||||||||||||||||||| Sbjct 483039 TACTGAGCAGGATTACTATCGCAACGACGAGTCATCAGTAGGGTAAAACTAACCTGTCTC 483098 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTA---GTGGGTGAACA 104 | |||||||||||||||||||||||||||||| | | ||||||||| Sbjct 483099 ACGACGGTCTAAACCCAGCTCACGTTCCCTATAATAGGCGGGTGAACA 483146 >seq208 Length=699694 Score = 89.7 bits (98), Expect = 9e-16 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 38 TAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGG 97 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| | || Sbjct 511375 TAGGGGAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATAGGCGG 511316 Query 98 GT 99 || Sbjct 511315 GT 511314 >seq6 Length=3143044 Score = 89.7 bits (98), Expect = 9e-16 Identities = 52/54 (96%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 38 TAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct 2135268 TAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAACTCACGTTCCCTAT 2135215 >seq7275 Length=4981 Score = 86.0 bits (94), Expect = 1e-14 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 41 GGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTG 100 |||||||||||||||||||| |||||||||| |||||||||| |||||||| | ||||| Sbjct 1783 GGTAAAACTAACCTGTCTCACGACGGTCTAAGCCCAGCTCACTTTCCCTATAGGCGGGTG 1724 Query 101 AA 102 || Sbjct 1723 AA 1722 >seq3553 Length=43453 Score = 84.2 bits (92), Expect = 4e-14 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 39 AGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGG 98 |||||||||||||||| ||||| |||||| ||||||||||||||||||||||| | || Sbjct 41148 AGGGTAAAACTAACCTTTCTCACGACGGTTTAAACCCAGCTCACGTTCCCTATAGGCAGG 41089 Query 99 TGAA 102 |||| Sbjct 41088 TGAA 41085 >seq21 Length=2039202 Score = 80.6 bits (88), Expect = 5e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 44 AAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAA 102 ||||||||||||||||| |||||||||||| ||||||||||||||||| | |||||| Sbjct 5559 AAAACTAACCTGTCTCAGGACGGTCTAAACGCAGCTCACGTTCCCTATAGGCTGGTGAA 5617 >seq1124 Length=91352 Score = 78.8 bits (86), Expect = 2e-12 Identities = 51/55 (93%), Gaps = 1/55 (2%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGT 84 |||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 77943 GTCA-CAGTAAGGTAAAACTAACCTATCTCACGACGGTCTAAACCCAGCTCACGT 77996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854310510144