Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1310 203 1e-49 seq940 163 9e-38 seq780 158 4e-36 seq490 113 1e-22 seq647 107 6e-21 >seq1310 Length=52976 Score = 203 bits (224), Expect = 1e-49 Identities = 132/145 (91%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 50938 TAGGGACAGTGGGAATCTCGTTAATTCATTCATGTACGTCACTAATTAGATGACGAGGCA 50997 Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484 ||| |||| ||||||| |||||| ||||||||||||||||||||||||| |||||||| Sbjct 50998 TTTAACTACTATAAGAGAATCATAGCTACTCCCGCCGTTTACCCGCGCTTGTTTGAATTT 51057 Query 485 CTTCACTTTGACATTCAGAGCACTG 509 |||||||| || |||||||||| || Sbjct 51058 CTTCACTTAGATATTCAGAGCAATG 51082 >seq940 Length=105884 Score = 163 bits (180), Expect = 9e-38 Identities = 93/95 (98%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 95 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTTGAC 36 Query 497 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 ||||||||||||||||||||||||||||||||||| Sbjct 35 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 1 Score = 158 bits (174), Expect = 4e-36 Identities = 92/95 (97%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 338 TTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCAT 397 ||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct 1012 TTGGCAGTGGTTTCGCTAGATAGTGGGTAGGGACAGTGGGAATCTCGTTAATCCATTCAT 953 Query 398 GCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||||||||||||||||||||||||||||||||||| Sbjct 952 GCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 918 >seq780 Length=162950 Score = 158 bits (174), Expect = 4e-36 Identities = 95/100 (95%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 22124 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTTG 22183 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534 |||||||||||||||| ||||||||||||||| | ||||| Sbjct 22184 ACATTCAGAGCACTGGACAGAAATCACATTGCATTAACAT 22223 Score = 91.5 bits (100), Expect = 5e-16 Identities = 52/53 (98%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 380 TCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21098 TCTCTTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 21150 >seq490 Length=321441 Score = 113 bits (124), Expect = 1e-22 Identities = 85/100 (85%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 273 AAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCG 332 ||| | || | ||||| ||||||||||||||| ||||| |||| ||| ||||||||| Sbjct 110546 AAGCCAGATTTGAGTCGAGCTCAACAGGGTCTCGTTTCCTCGCTAATTTTTCCAAGCCCG 110487 Query 333 TTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACA 372 |||||||||| |||||||||||||||||| | |||||||| Sbjct 110486 TTCCCTTGGCAGTGGTTTCGCTAGATAGTGGGTAGGGACA 110447 >seq647 Length=219609 Score = 107 bits (118), Expect = 6e-21 Identities = 77/88 (88%), Gaps = 3/88 (3%) Strand=Plus/Minus Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 ||| |||| ||||||||||||||| |||||||||||||| ||||||||| ||||||||| Sbjct 183591 TTGACTACTTTAAGAGAGTCATAGCTACTCCCGCCGTTTGCCCGCGCTTACTTGAATTTC 183532 Query 486 TTCACTTTGA---CATTCAGAGCACTGG 510 |||||||||| |||||||||| ||| Sbjct 183531 TTCACTTTGATGGTATTCAGAGCAATGG 183504 Score = 84.2 bits (92), Expect = 7e-14 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 372 AGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 431 |||||||| || |||||| ||||||| ||||||||||||||||||||||||||||| || Sbjct 213723 AGTGGGAACCTTGTTAATTCATTCATATGCGTCACTAATTAGATGACGAGGCATTTGACT 213664 Query 432 A 432 | Sbjct 213663 A 213663 Score = 84.2 bits (92), Expect = 7e-14 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 372 AGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 431 |||||||| || |||||| ||||||| ||||||||||||||||||||||||||||| || Sbjct 218798 AGTGGGAACCTTGTTAATTCATTCATATGCGTCACTAATTAGATGACGAGGCATTTGACT 218739 Query 432 A 432 | Sbjct 218738 A 218738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635028729152