Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq9122 491 1e-136 seq1772 194 5e-47 seq1760 194 5e-47 >seq9122 Length=2466 Score = 491 bits (544), Expect = 1e-136 Identities = 321/347 (93%), Gaps = 6/347 (2%) Strand=Plus/Minus Query 162 ACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTT 221 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2466 ACCCGTTGAAACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTT 2407 Query 222 GAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGG 281 ||||||||||||||| || ||||||||||||||||| |||||||||||||||| ||| | Sbjct 2406 GAATGAACCATCGCCAGCACAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAG 2347 Query 282 AGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAG--TCGGGGTT 339 || || |||| | ||| |||||||||||||||||||| | ||||| ||| ||| | || Sbjct 2346 AGTCC-GAAGA-CATTGATTTTTTATCTAATAAATACATCTCTTCCAAAGGGTCGAGATT 2289 Query 340 TTTAGCATGTATTAGCTCTAGAATTACCACGGTTAT-CCATGTAGTAA-GGTACTATCAA 397 || ||||||||||||||||||||||||||| ||||| ||||||||||| || |||||||| Sbjct 2288 TTAAGCATGTATTAGCTCTAGAATTACCACAGTTATACCATGTAGTAAAGGAACTATCAA 2229 Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTT 457 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 2228 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTT 2169 Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2168 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 2122 >seq1772 Length=62193 Score = 194 bits (214), Expect = 5e-47 Identities = 130/145 (90%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 56 TACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG 115 ||||||||||| | ||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct 18094 TACCTCCCCGTACCCGGAGTGGGTAATTAGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG 18153 Query 116 CCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCA 175 |||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||| Sbjct 18154 CCGTTTCTCAGGCTCCCTCTCCGGAATCAAACCCTGATTCCCCGTTACCCGTTACAACCA 18213 Query 176 TGGTAGGCCACTATCCTACCATCGA 200 |||||||| | ||||||||||| Sbjct 18214 TGGTAGGCGCAGAACCTACCATCGA 18238 >seq1760 Length=111739 Score = 194 bits (214), Expect = 5e-47 Identities = 130/145 (90%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 56 TACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG 115 ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct 78639 TACCTCCCCGTACCGGGAGTGGGTAATTAGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG 78580 Query 116 CCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCA 175 ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||| Sbjct 78579 CCGTTTCTCAGGCTCTCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACCA 78520 Query 176 TGGTAGGCCACTATCCTACCATCGA 200 |||||| | | ||||||||||| Sbjct 78519 TGGTAGCCGCAGAACCTACCATCGA 78495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510241800704