Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1096 203 3e-47 >seq1096 Length=295351 Score = 203 bits (224), Expect = 3e-47 Identities = 598/912 (66%), Gaps = 20/912 (2%) Strand=Plus/Minus Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082 ||||| || || || ||||| || | ||||| |||| ||||| ||||| | |||||| Sbjct 68039 TTGCATACTGCGATTTCGTCCGGTGAAGTATATTCGATGATTTCCGTGCATAAATTACTA 67980 Query 66083 CAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATC 66142 | ||||| || | ||||||||| || ||||| | ||| || ||||| ||||||| | Sbjct 67979 CTTTTGATGGTACCAAGATTCTGTTGGTTGCTCTTTCTATTACAGGCATCTTTGTACAAC 67920 Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCC 66202 || || |||||||| || ||||||||||| |||| || || | |||||| | | || Sbjct 67919 ATATAAGGAGTGCCAGTTTCAACTTGGGATACAATAATAGCTTTCCAAAGTTCCCTAGCT 67860 Query 66203 TTCAC-CGT---ACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAA 66258 | || || | ||| ||| | || || || | |||||||| | || || Sbjct 67859 TGTACTTGTTTGATGTAATTCCCCTCATT----CTCATACTTCTCGTAGAGTTTCTCAAA 67804 Query 66259 GGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATC 66318 ||| ||||| ||||| |||| ||| | |||| |||||||| || |||||| | Sbjct 67803 TTCTTCTCCCCAACAATCGGAAAGACCCGGAGCCATGTGAGGACACATAAGAGACCAAAC 67744 Query 66319 ACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATC 66378 ||||| ||||| || ||| || | ||| || ||||| | || || || | ||| Sbjct 67743 ACCATTTGAATCTACTCGTTTCATGAACAAATCTGGGATCCACAATGCATAAAATAAATC 67684 Query 66379 GCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGT 66437 | |||||| | || || |||| ||| || || || | |||||||| |||| | Sbjct 67683 TCTTGCTCGGTATTCTTCCTTGCCAGTG-TTCTTCTTTAAATTAAGGAACTCGAAGACAT 67625 Query 66438 CGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGT 66497 | |||||||| ||||| | ||| || || |||| || ||||| ||| ||||||| Sbjct 67624 CAGCATGCCACGGTTCTAAGTATATTGCAAACGCTCCTGGTCGTTTATTGCCTCCTTGGT 67565 Query 66498 CGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGC 66557 |||| || | || | || || || || ||| ||||| || ||||| || | Sbjct 67564 CGACATACCTTGCCGTGCTATTAAAAACCTTCAGCATAGGTACTAGACCGTTCGACACAC 67505 Query 66558 CATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATAC 66617 | || ||||| | || | |||| || | |||| |||||| || | |||||||| Sbjct 67504 CGTTAGTGCCTGCAATATATGTTCCTTTGGCTCTGATATTGTGAACGTTGACACCAATAC 67445 Query 66618 CACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCA--CTGTCCGGAATATGCCGTCAAT 66675 | || || | ||| || || ||| || | |||| | || ||| || || ||||| Sbjct 67444 CTCCCGCTGACTTAGAAATATAAGCGCATTGCGCCAGGCAGT--TGAAAATACCCTCAAT 67387 Query 66676 GGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGC 66735 || | || | || || | || ||| | ||| ||| |||| || | || Sbjct 67386 ACTATCGTCTGGCATCATTAGAAGAAAACAAGAAGACAATTGAGGTCTGGGAGTACCCGC 67327 Query 66736 CGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTA--ATGGCGA-GACATGTAATTGTACGT 66792 || || | || || | ||||| || || || | ||| ||| |||| || || Sbjct 67326 GGAAAATAAAGTTGGACTTGCGTGTGTGAAATATCTTTCCGATAACA---AATTATAAGT 67270 Query 66793 CTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTA 66852 || || | || || |||| ||| |||||||| || | || || ||| || | || Sbjct 67269 TTCTATAGCGGCGTCTATGTCTTCCCCATGAATTCCCACAGCGACTCTCATGAGCATGTG 67210 Query 66853 TTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTT 66912 ||||| ||||| || | | | ||||| | | | ||||| || || || || || Sbjct 67209 CTGAGGGCGTTCAACAATCTTCCCGTTGATTTTGAGCAGATAGGAACGCTCAAGAGTTTT 67150 Query 66913 GATACCAAAGTA 66924 || ||| ||||| Sbjct 67149 GAAACCGAAGTA 67138 Score = 118 bits (130), Expect = 8e-22 Identities = 310/467 (66%), Gaps = 12/467 (3%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || || |||||||||| || ||||| | || || || | |||||||||||| ||| Sbjct 68966 TCCACGGTAAACTGGATCGGTTTGGCAGCGGGTTTTGTTCTCAAATAGTACATGCCTGTC 68907 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || || || ||||| | ||||| |||||||| || | |||| | || | Sbjct 68906 TTAAGCCCCTTGCGCCAGCCGTAGAAGTGCATCGACGAGAGGACACCATATGTTGGTTTT 68847 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257 | || || || ||||| |||||||||||| ||| | |||||||| || ||||| Sbjct 68846 TCGACGTGAATGTTCAAACTCTGACTCTGATCAATGAAGGCCCCACGATCGGCGGCCATA 68787 Query 65258 TCAATGATACGACGTCC--CGATATCTCCCAGACGGTCTTGTACA-GGC---GACGTACC 65311 | | ||| || | | ||| ||||||||||| |||||||| | || || || | Sbjct 68786 TTGAGGAT--CACTTTCTGCGAAATCTCCCAGACCGTCTTGTAAATAGCTTTGAGGT-CT 68730 Query 65312 TCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGC 65371 ||| ||||| || | || ||||| ||||| | || | || |||| | Sbjct 68729 TCA---GGAATATCAGGGACGTTCTGGATAGAACCGCAGTTGGCTAAGATTTGATTTTTC 68673 Query 65372 ATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACT 65431 |||| || ||||| || || | | | || | ||| || | |||| | | Sbjct 68672 ATCGTTTCATCCCACAGGCCTCGCTCTGTCAAGTCTTTGAGCAAATGGTGGTTGACTATT 68613 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 ||||| ||||| || | || |||||| || ||||| || ||| ||||||| |||| Sbjct 68612 TGGAATTCGCCCGATAAGACCCGACGGGTGTAAATGTTTGAGGTGTAAGGTTCAATGGAT 68553 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGC 65538 ||| |||| || || || || ||||| || || || ||||| || || Sbjct 68552 TCATTGTTTCCAAGGATCTGAGCAGTGGAAGCTGTCGGCATAGGTGC 68506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397517249699360