Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq1556 188 1e-45 >seq1556 Length=1045 Score = 188 bits (208), Expect = 1e-45 Identities = 246/332 (74%), Gaps = 19/332 (6%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||| ||| |||||| ||| | ||||||||| ||| |||| | | | | Sbjct 1011 AGGGGAGTGAAAGAGAACCTGAAACCGTGTGCCTACAAGTAGTCAAAGCCCATTAAAG-G 953 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACC-AGCGAGGTTAAG 129 |||| ||||||||||||| | ||||| || ||||||| ||| | |||||||||||| Sbjct 952 GTGATGGCGTGCCTTTTGTAGAATGAACCGGCGAGTTA--CGTTAAATAGCGAGGTTAAG 895 Query 130 GGCTTCAG----GCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC-GAGTTGG 184 |||| | | | ||||| || ||||||||| || || ||||||| |||||| Sbjct 894 ----TCAGAAAAGACGG--AGCCGGAGCGAAAGCGAGTCTGAAGAGGGCGAGAGAGTTGT 841 Query 185 TGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCG 244 | | ||||| ||||||| |||| ||||||| || |||||||||| ||||||| ||| Sbjct 840 TTGATGTAGACCCGAAACCAAGTGACCTACCCATGACCAGGTTGAAGGTGCGGTAAAGCG 781 Query 245 TGATGGAGGACCGAACC--GGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGG 302 |||||||||||||| |||| ||| |||| | |||||| | | |||||| || Sbjct 780 CACTGGAGGACCGAACCCACGTAA--GTTAAAAATTGCGGGGATGAGTTGTGGGTAGCGG 723 Query 303 TGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||| |||| | |||| ||| |||||| || Sbjct 722 TGAAATTCCAAACGAACTTGGAGATAGCTGGT 691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972776351232