Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq446 307 2e-81 >seq446 Length=3012682 Score = 307 bits (340), Expect = 2e-81 Identities = 214/241 (89%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 42 GTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGA 101 ||||||||||||||||||| |||||||||||||||||||||||||||| || | |||||| Sbjct 2057609 GTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTTGGCGGGTGA 2057550 Query 102 ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161 ||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct 2057549 ACAATCCGACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGAT 2057490 Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221 |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 2057489 CAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACT 2057430 Query 222 TTTCTGGCACCTCTAGCCTCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTT 279 |||||| ||||||| || ||| ||| | | | |||||||||||||||| |||| Sbjct 2057429 TTTCTGACACCTCTTGCTGAAAACTCTTCAA--GCCAAAAGGATCGATAGGCCGTGCTTT 2057372 Query 280 C 280 | Sbjct 2057371 C 2057371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854379229536