Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq1556 259 1e-66 >seq1556 Length=1045 Score = 259 bits (286), Expect = 1e-66 Identities = 310/413 (75%), Gaps = 25/413 (6%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| ||||||| |||| |||| ||| | | || || Sbjct 129 CGACTACGCCTTTCGGCCTCGCCTTAGGTCCCGACTTACCCTGGGCGGACGAGCCTGCCC 188 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 | |||| |||| | |||||||| |||||| |||| || |||||||||| || | Sbjct 189 CAGGAAACCTTAGTCTTTCGGCGGATAGGATTCTCACCTATCTTGCGCTACTCATACCGG 248 Query 121 CATTCTCACTCGCATCAACTC-CACCACACAGTCAC-CCGGCA--GCTTCAC--CACTGA 174 |||||||||| || | | | ||||| |||| |||| ||||||| | || | Sbjct 249 CATTCTCACT----TCTAAGCGCTCCACA-AGTCCTTCCGGTCTTGCTTCACAGCCCTTA 303 Query 175 CACGACGCTCCCCTACCCA-------ACCACACAGGTTGCCACAGCTTCGGCGGATAACT 227 | |||||| |||||| || || || |||||| ||||| || Sbjct 304 GA--ACGCTCTCCTACCACGCGTATTACTACGCAT----CCACAGTTTCGGTACTATGCT 357 Query 228 TAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTT 287 || |||||| || ||| ||||||| | ||||| ||| |||||||||||||||||||||| Sbjct 358 TA-GCCCCGGTAAATTTTCGGCGCAGCGTCACTCGACTAGTGAGCTATTACGCACTCTTT 416 Query 288 CAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCC 347 || | |||||||||| |||||||| |||| |||||||||||||||||||||||||| || Sbjct 417 AAATGGTGGCTGCTTCTAAGCCAACATCCTAGTTGTCTACGCAACTCCACATCCTTTTCC 476 Query 348 ACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 ||| || | || ||| ||||| ||| ||||||||||||||||||| ||| Sbjct 477 ACTTAGCATAGATTTTGGGACCTTAACTGGTGATCTGGGCTGTTTCCCTTTCG 529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177571372544