Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq1556 277 6e-72 >seq1556 Length=1045 Score = 277 bits (306), Expect = 6e-72 Identities = 357/485 (74%), Gaps = 11/485 (2%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAG--TCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||| ||| ||||||| || | | | | ||||||||||||||||||||| ||||||| Sbjct 867 CGAGTCTGAAGAGGGCGAGAGAGTTGTTTGATGTAGACCCGAAACCAAGTGACCTACCCA 808 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 || ||||| |||||||||||||| ||| ||||||| |||||||||| | ||| |||| Sbjct 807 TGACCAGGTTGAAGGTGCGGTAAAGCGCACTGGAGGACCGAACCCACGTAAGTTAAAAAT 748 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 | ||||||||| ||||||||| ||||||| | |||| |||||||| |||||||||||| Sbjct 747 TGCGGGGATGAGTTGTGGGTAGCGGTGAAATTCCAAACGAACTTGGAGATAGCTGGTTCT 688 Query 180 CTCCGAAAACTATTTAGG--TAG--TGCCTCAAGTATCACCATCGGGGGTAGAGCACTGT 235 |||||||| |||||| ||| || | || || | || || |||||||| |||| Sbjct 687 CTCCGAAATAGCTTTAGGGCTAGCCTGGTGCGAGGATGATAAT-GGAGGTAGAGCTCTGT 629 Query 236 TATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTT 295 | | | ||||| | | | |||| || ||||| ||||| | ||| | Sbjct 628 TTGGACGAGGGGCCCGTCAGGGGTTACTGAATTCAGATAAACTGCGAATAC-CATATATC 570 Query 296 TTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGA 355 | | | ||||| || | ||| |||| ||||| ||| ||| || | || || Sbjct 569 AAAGCACTGGAGTCAGACTGCGAGTGATAAGATCCGTAGTCGAAAGGGAAACAGCCCAGA 510 Query 356 CTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGA 415 | ||| ||||| ||| |||| ||||||| || || || || |||| ||| Sbjct 509 TCACCAGTTAAGGTCCCAAAATCTATGCTAAGTGGAA--AAGGATGTGGAGTTGCGTAGA 452 Query 416 CAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAG 475 || ||||||||||||||| |||||||||| |||||||||||||||||| |||||||||| Sbjct 451 CAACTAGGATGTTGGCTTAGAAGCAGCCA-CCATTTAAAGAGTGCGTAATAGCTCACTAG 393 Query 476 TCGAG 480 ||||| Sbjct 392 TCGAG 388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689558925824