Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20dorsata_20[refseq_20GCF_5F000469605.1_202013-09-24] 4,040 sequences; 230,340,171 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq823 145 2e-32 seq4007 91.5 5e-16 >seq823 Length=3571 Score = 145 bits (160), Expect = 2e-32 Identities = 102/116 (88%), Gaps = 4/116 (3%) Strand=Plus/Minus Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 |||||||||| | || | ||||||||||||| || ||| |||||||||||||| | Sbjct 828 CGAGGCATTTCGTTAGCA----AGAGTCATAGTTATTCTCGCTGTTTACCCGCGCTTTTT 773 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 772 TGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 717 >seq4007 Length=4199 Score = 91.5 bits (100), Expect = 5e-16 Identities = 67/78 (86%), Gaps = 4/78 (5%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCAT----GCGCGTCACTAATTAGA 414 ||||||||||||||| ||||||||||| |||||||| || ||||| |||||||||| Sbjct 4129 AGTAGATAGGGACAGAGGGAATCTCGTGAATCCATTTATAATGCCGCGTTACTAATTAGA 4070 Query 415 TGACGAGGCATTTGGCTA 432 |||| || |||||||||| Sbjct 4069 TGACAAGACATTTGGCTA 4052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635133937920