Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20dorsata_20[refseq_20GCF_5F000469605.1_202013-09-24] 4,040 sequences; 230,340,171 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq411 159 1e-36 >seq411 Length=11774 Score = 159 bits (176), Expect = 1e-36 Identities = 364/541 (67%), Gaps = 69/541 (13%) Strand=Plus/Minus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| || ||| ||||||||| ||||| | ||||||||||| Sbjct 5808 TACTCATTCCAATTACGGGA-------GAGTCCTGTATCATTATTTTTCGTCACTACCTC 5756 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || || |||| || ||||||| |||||||||||| || ||| ||| |||||| Sbjct 5755 CCAATGCTGGGAGTGAGTAATTTACGCGCCTGCTGCTTTTCTTAGATATGGTAG------ 5702 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||| | || |||||||||||||| ||| ||||||||||| || || | ||| | Sbjct 5701 --CAGACGCCTTCTCCGGAATCGAATCCTGATTCCCCGTTATCCATTACAATCAT----G 5648 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG--GC 239 || | | || ||||| |||||||| || ||| ||||| | | | | | ||| || Sbjct 5647 GCGCAGAACTTATCATCGGCAGTTGATAAGGAAGACATTTGGAAG-ATCGTTACCGATGC 5589 Query 240 T-CAAGGCCATGCGAT--TCGTTAAGTTATTATGAATC------ACCAAGGAGCCCCGAA 290 | | | ||||||||| | | || |||| | || || || || |||| Sbjct 5588 TAGATGACCATGCGATCAGCATAAAAATATTCAAAGTCATCGAAACAAATGATGGACGAA 5529 Query 291 -----GGGC-GT-------TGGTTTTTTATCTAATAAATA-CACCCCTTCC--------- 327 | || || | || || || ||||||| | || ||| || Sbjct 5528 CGAACGAGCTGTCCGCCACTCATTGTTGATATAATAAAAAGCATTCCTCCCATCCCTCAG 5469 Query 328 -GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA 386 ||| | | ||| ||| ||||| || |||||||| || |||||||| ||| || Sbjct 5468 AGAAATTCTG--TTTCTGCACATATTAACTTTAGAATTATCATAGTTATCCAAGTA--AA 5413 Query 387 GGT----ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT 442 || |||||| ||| ||| |||||| |||||||||||||||||| ||||||| || Sbjct 5412 TGTATCCACTATCGAATGAACCATAACTTATTTAATGAGCCATTCGCGGTTTCACCTTA- 5354 Query 443 AGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGC 502 ||| | | | | |||||||| |||||| ||||| |||||||| ||||||||| Sbjct 5353 --ATTCGGCA---TGAAAGATGCATGGTTTAATCCTTGAGCTAAGCATATAACTACTGGC 5299 Query 503 A 503 | Sbjct 5298 A 5298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510338979840