Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2812 212 9e-53 seq327 100 4e-19 >seq2812 Length=11703 Score = 212 bits (234), Expect = 9e-53 Identities = 186/226 (82%), Gaps = 7/226 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 2105 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 2162 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || |||||||| | ||||| | ||||| | | |||| | || Sbjct 2163 CTCGTTCATGGGGAATAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGTT 2222 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||||||| || | || || ||| | | ||||||||||||||||||| Sbjct 2223 ACCCGGGCCTTTCGGCCAGGGAAA---ACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 2279 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 2280 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 2324 >seq327 Length=86727 Score = 100 bits (110), Expect = 4e-19 Identities = 158/220 (72%), Gaps = 20/220 (9%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||| |||||| |||||| || ||||||||||||| ||||||| | ||||| |||||| | Sbjct 72831 GTAGAAAGGGTAGGGACATAATCAACGCGAGCTT-ATGACTCTTGTTTACT-GGAATT-C 72775 Query 61 CTCG--TTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA- 117 |||| || | | | || |||| || |||| | |||| | | |||| || Sbjct 72774 CTCGAATTCATGGCGAATAATTATAAGTCTCTAGC------ACGAAGCAGATTCAGCGAG 72721 Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 ||| |||||| | || |||| || | || || ||| | | |||| || | ||| Sbjct 72720 TTATCCGGACTTTTCAGCCAGGGAAA---ACACGCTGATTCCTTCAG-----CGAGTGTG 72669 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 | || |||||| ||||||| |||||||||||||||||||| Sbjct 72668 CAGCTCAGAACGTCTAAGGACATCACAGACCTGTTATTGC 72629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751942113390