Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq298 306 1e-80 >seq298 Length=2067 Score = 306 bits (338), Expect = 1e-80 Identities = 304/391 (78%), Gaps = 2/391 (1%) Strand=Plus/Plus Query 21 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTA 80 |||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||| Sbjct 913 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGATTTA 972 Query 81 CTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAAC 140 ||||||||||||| ||||||||| | ||| ||| ||||||| ||| |||||||| Sbjct 973 TTGGGCGTAAAGCGAACGCAGGCGGGAGAACAAGTCAGCTGTGAAAGCCCTCGGCTTAAC 1032 Query 141 CTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACG 200 | ||||| |||| || |||| || ||||| ||||| | |||||| |||| | Sbjct 1033 CGGGGAAGTGCAGCTGAAACTGTTTTTCTTGAGTGCAGAAGAGGAGAGTGGAACTCCATG 1092 Query 201 TGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGG 260 |||||| ||| ||||||||||||| |||| |||||||| |||||||||| || | |||| Sbjct 1093 TGTAGCGGTGGAATGCGTAGATATATGGAAGAACACCAGTGGCGAAGGCGGCTCTCTGGT 1152 Query 261 ATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 320 | ||||||||| | | ||||||| |||| ||| ||||||||||||||||||||||| Sbjct 1153 CTGTAACTGACGCTGAGGTTCGAAAGCATGGGTAGCGAACAGGATTAGATACCCTGGTAG 1212 Query 321 TCCACGCCCTAAACGATATCAACTAGTTGTTGGG-GATTTACTTC-CTTGGTAACGTAGC 378 |||| ||| |||||||| ||| ||||||| | ||| | | || || | ||| Sbjct 1213 TCCATGCCGTAAACGATGAGTGCTAAGTGTTGGGAGGTTTCCGCCTCTCAGTGCTGCAGC 1272 Query 379 TAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 |||||| | ||| ||||||||||| ||| Sbjct 1273 TAACGCATTAAGCACTCCGCCTGGGGAGTAC 1303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289497528384