Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq297 289 7e-76 >seq297 Length=3220 Score = 289 bits (320), Expect = 7e-76 Identities = 317/426 (74%), Gaps = 24/426 (6%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || | |||||||||| | ||| |||||||| ||||||| || ||||||| Sbjct 1046 CGCGGGTAACCCGCATCTTCACGGGTATTATAATTTCACCGAGTCTCTCGTTGAGACAGT 1105 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 ||| ||| |||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 1106 GCCCAAATCATTACACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1165 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||| |||||||| | ||||||| | Sbjct 1166 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAGTTCGCTGCTTCGCTTAC 1225 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 ||| || | |||||||||| |||||||||||| |||| ||||||||||| ||| Sbjct 1226 GCTTACAGCTCTCCTTAACCTTCCAGCACCGGGCAGGTGTCAGCCCCTATACGTCGTCTT 1285 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 ||| ||||||||| |||||||||| ||||||||| | ||||| | || || | Sbjct 1286 TCGACTTTGCAGAGACCTGTGTTTTTGATAAACAGTTGTTTGGGCCTATTCACTGCGGCT 1345 Query 301 GGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACG 360 ||| | ||| |||| || | |||||||||||||||||| Sbjct 1346 GGCTT----TTA--------------------CACCAGCACCCCTTCTCCCGAAGTTACG 1381 Query 361 GTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCC 420 | || ||||||| |||||||| | |||||||||| | |||| || ||||| || | Sbjct 1382 GGGCTATTTTGCCGAGTTCCTTAACGAGAGTTCTCTCGCTCACCTTAGTGTTCTCCACTC 1441 Query 421 AACCAC 426 || || Sbjct 1442 GACTAC 1447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260699816832