Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2812 217 2e-54 seq327 143 4e-32 >seq2812 Length=11703 Score = 217 bits (240), Expect = 2e-54 Identities = 218/292 (75%), Gaps = 47/292 (16%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2257 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 2316 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-------------- 117 | |||| || | |||| |||||| || ||||||||||| Sbjct 2317 C-TCAATCT-CGTGCGGCTAGAAGCCGCCTGTTCCTCTAAGAAGATTTGTTTGTACGTTG 2374 Query 118 ---------AGCCACCAACCATAGTCGATGG----------------------GGCTATT 146 | ||||| ||| || ||| || | ||||| Sbjct 2375 GTAGTAAAAACCCACCGACCGAAGCCGAGGGCCTTCGAGATACCATAAGTTACGTCTATT 2434 Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 ||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 2435 TAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAA 2494 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 2495 GAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 2546 >seq327 Length=86727 Score = 143 bits (158), Expect = 4e-32 Identities = 102/117 (87%), Gaps = 4/117 (3%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 || ||||||||||||| || || |||||||||||||||||| ||||||||| ||| |||| Sbjct 72520 CTTTTTAGCAGGTTAAAGTTTCATTCGTTATCGGAATTAACTAGACAAATCGCTCTACCA 72461 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||| |||| |||||||| ||||||| ||||||||||||||||||||| |||| Sbjct 72460 ACTAACAACGACCATGCACTACCACCC----AATCAAGAAAGAGCTATCAATTTGTC 72408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796738664826