Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq297 297 4e-78 >seq297 Length=3220 Score = 297 bits (328), Expect = 4e-78 Identities = 266/329 (81%), Gaps = 5/329 (2%) Strand=Plus/Minus Query 13 GAGGCAAAGA-GATGGATACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGT 71 ||| || ||| ||| | |||||||||||| ||| | |||||||||||||||| ||| Sbjct 969 GAGCCAGAGAAGATAG-TACGCCAGTATTATCAGAGGCAATGTTGGGATACTACCCTTGT 911 Query 72 TGTATTGGATTTCTAACCGGACGACGTATAACCGTTG-ACGGGACAGTGTCAGTCGGGCA 130 | || | ||||||| | | | | ||| || | | ||||||||||||| |||||| Sbjct 910 TTGATGGCTGCTCTAACCAG--GGCCTCTAAGCGAGGCATGGGACAGTGTCAGACGGGCA 853 Query 131 GTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCT 190 ||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| Sbjct 852 GTTTGACTGGGGCGGTCGCCTCCTAAAGAGTAACGGAGGCGCCCAAAGGTTCCCTCAGAA 793 Query 191 TGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAA 250 ||| |||||| ||| | || |||| ||||| | ||||| | |||||||||| | | ||| Sbjct 792 TGGTTGGAAATCATTCACAGAGTGTAAAGGTATAAGGGAGCTTGACTGCGAGAGCGACAA 733 Query 251 GTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCG 310 || ||||||||||||||||||||||| ||||| || ||| | | |||||| |||| || Sbjct 732 CTCGAGCAGGGACGAAAGTCGGGCTTAGTGATCTGGTGGTACCGCATGGAAGGGCCATCA 673 Query 311 CTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| ||||||||||||||||||||||||| Sbjct 672 CTCAACGGATAAAAGCTACCCTGGGGATA 644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982321938496