Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq298 185 2e-44 >seq298 Length=2067 Score = 185 bits (204), Expect = 2e-44 Identities = 252/349 (72%), Gaps = 16/349 (5%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||| ||||||| |||||||| ||| |||||||| ||| || ||||| ||| || || Sbjct 842 CTTTACGATCCGAAAACCTTCTT-CACTCACGCGGCGTTG-CTCCATCAGACTTGCGTCC 785 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||| || |||||| ||||||||||||||||||||| ||| |||||||||||| ||| Sbjct 784 ATTGTGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTTTGGGCCGTGTCTCAGTCCCAA 725 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| | ||||| |||||| | | || | ||| | |||||||| |||| |||||| | Sbjct 724 TGTGGCCGATCAGTCTCTCAACTCGGCTATGCATCATTGCCTTGGTAAGCCGTTACCTTA 665 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCT---- 236 ||||||||||||| | | ||| |||| ||| | | || |||| | | ||| Sbjct 664 CCAACTAGCTAATGCACCGCGGGCCCATCCTTTAGTG-ACAGCTCGAAAGCCGCCTTTCA 606 Query 237 --------GCTTTCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATC 288 || | | | | | | ||| ||||||||| | |||||| | | |||| Sbjct 605 TAGCTTGAGCATGCGCTCTTGCTTCTTATTTGGTATTAGCACCTGTTTCCAAGTGGTATC 546 Query 289 CCCCACTACCAGGCAGATT-CCTAGGCATTACTCACCCGTCCGCCGCTC 336 || ||| ||||| || || | | |||||||||| |||||||||| Sbjct 545 CCAAGCTAAAGGGCAGGTTGCCCACGTGTTACTCACCCATCCGCCGCTC 497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071914818880