Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq297 322 2e-85 seq2812 78.8 3e-12 >seq297 Length=3220 Score = 322 bits (356), Expect = 2e-85 Identities = 419/570 (74%), Gaps = 22/570 (4%) Strand=Plus/Plus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 ||||||||||| |||| || | |||||||| || | | ||| | | | || ||||| Sbjct 2096 TCGACTACGGATCTTA-TCACTCGCAGTCTGACTCCAGTGCTTTGATATAT-GGTATTCG 2153 Query 61 GAGTTTGGTTGATTTCGGTAAGCT-TGTGGGCCCCCTAGACCATCCAGTGCTCTACCTCC 119 ||||| ||| ||| |||| | || || ||||| | ||| ||| ||||||||||| Sbjct 2154 CAGTTTATCTGAATTCAGTAACCCCTGACGGGCCCCTCGTCCAAACAGAGCTCTACCTCC 2213 Query 120 GGGAAGAAACACGCGAC--GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGA 177 | | | ||| | ||| |||||| ||||||| |||||||||||||| | | Sbjct 2214 ATTATCATCCTCGCACCAGGCTAGCCCTAAAGCTATTTCGGAGAGAACCAGCTATCTCCA 2273 Query 178 AGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGG 237 |||| | |||| ||||||| ||| ||||| |||||||| || |||| ||| || |||| Sbjct 2274 AGTTCGTTTGGAATTTCACCGCTACCCACAACTCATCCCCGCAATTTTTAACTTACGTGG 2333 Query 238 GTTCGGTCCTCCA-CGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCG 296 ||||||||||||| ||| | ||||| |||||||||| ||||| ||| |||||| | Sbjct 2334 GTTCGGTCCTCCAGTGCGCT-TTACCGCACCTTCAACCTGGTCATGGGTAGGTCACTTGG 2392 Query 297 CTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC 356 ||||||||| ||| | |||| |||||| ||| |||||||||||||| ||||| | Sbjct 2393 TTTCGGGTCTACATCAAACAACTCTCTCGCCCTCTTCAGACTCGCTTTCGCTCCGGCTCC 2452 Query 357 --CCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGC 414 | | |||||||||| | |||| ||||||| || ||||||| |||||||| Sbjct 2453 GTCTTTTCTGACTTAACCTCGCTATTTAACG-TAACTCGCCGGTTCATTCTACAAAAGGC 2511 Query 415 ACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTT 474 ||||| ||||| | | || || ||| ||| ||||||||||| ||||| Sbjct 2512 ACGCCATCACC-----CTTTAATGG-------GCTTTGACTACTTGTAGGCACACGGTTT 2559 Query 475 CAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCC 534 ||||| || ||||||||||| | ||||| ||||||||||||||||||||||||| || | Sbjct 2560 CAGGTTCTCTTTCACTCCCCTTCCGGGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTC 2619 Query 535 GCTATCGGTCACCAAGGAGTATTTAGGCTT 564 ||||||||||| ||||||||| ||| Sbjct 2620 ACTATCGGTCACATTCTAGTATTTAGCCTT 2649 >seq2812 Length=11703 Score = 78.8 bits (86), Expect = 3e-12 Identities = 77/97 (79%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 470 GGTTTCAGGTACTATTTCACTCCC-CGCCAGGGGTACTTTTCACCTTTCCCTCACGGTAC 528 ||||||| ||||| || |||| | | || | | ||||||| |||||||||||||||| Sbjct 11120 GGTTTCACGTACTCTTGAACTCTCTCTTCAAAGTT-CTTTTCAACTTTCCCTCACGGTAC 11178 Query 529 TTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565 |||| ||||||||||| | | ||||||||| |||| Sbjct 11179 TTGTTCGCTATCGGTCTCGTGGTAGTATTTAGCCTTA 11215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817455573504