Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq297 224 2e-56 seq2812 80.6 7e-13 >seq297 Length=3220 Score = 224 bits (248), Expect = 2e-56 Identities = 288/382 (75%), Gaps = 14/382 (4%) Strand=Plus/Plus Query 42 GTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATC 101 || |||||||||||||||| | ||||| ||||| ||||||| ||| || ||| || Sbjct 2330 GTGGGTTCGGTCCTCCAGTGCGCT-TTACCGCACCTT-CAACCTGGTCATGGG-TAGGTC 2386 Query 102 GCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGA-CGCCCTAGTAAGACTCGCTTTTCGC 160 | ||||| |||||||| || | | ||| |||||| | ||||||||||| ||| Sbjct 2387 ACTTGGTTT-CGGGTCTACATCAAA-CAACTCTCTCGCCCTCTTCAGACTCGCTTT-CGC 2443 Query 161 TACGCCTCCC-CTATTCGG--TTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTAT 217 | || |||| || ||| | |||| || || | | || ||| |||| | |||| | Sbjct 2444 TCCGGCTCCGTCTTTTCTGACTTAACCTC-GCTATTTAACGTAACTCGCCGGTTCATTCT 2502 Query 218 ACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTC 277 |||||||| |||| |||||| || |||||| ||| |||||| ||| |||||||| Sbjct 2503 ACAAAAGGCACGCCATCACCCTTTAA--TGGGCTTTGACTACTTGTAGGCACACGGTTTC 2560 Query 278 AGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTC 337 ||| ||| |||||||||||| ||||||||||||||| |||||||||||||||||| |||| Sbjct 2561 AGGTTCTCTTTCACTCCCCT-TCCGGGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTC 2619 Query 338 ACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAG 397 ||||||||||| ||||||||||||||| |||||||| | | |||| | | Sbjct 2620 ACTATCGGTCACATTCTAGTATTTAGCCTTGCGAGATGGTCCTCGCTGCTTCAATCGGAA 2679 Query 398 TTTCTCGTGCTCCGTCCTACTC 419 || |||||| |||| ||||||| Sbjct 2680 TTCCTCGTGTTCCGACCTACTC 2701 >seq2812 Length=11703 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 11118 ACGGTTTCACGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 11176 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| |||| ||||||||| ||||||||||||||| || Sbjct 11177 ACTTGTTCGCTATCGGTCTCGTGGTAGTATTTAGCCTTAGA 11217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241501342464