Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq297 260 3e-67 >seq297 Length=3220 Score = 260 bits (288), Expect = 3e-67 Identities = 306/410 (75%), Gaps = 19/410 (5%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| ||||||| |||| |||| ||| | | || || Sbjct 1698 CGACTACGCCTTTCGGCCTCGCCTTAGGTCCCGACTTACCCTGGGCGGACGAGCCTGCCC 1757 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 | |||| |||| | |||||||| |||||| |||| || |||||||||| || | Sbjct 1758 CAGGAAACCTTAGTCTTTCGGCGGATAGGATTCTCACCTATCTTGCGCTACTCATACCGG 1817 Query 121 CATTCTCACTCGCATCAACTC-CACCACACAGTCACCCGGC--AGCTTCACCACTGACAC 177 |||||||||| || | | | |||| | | | || |||||| || || | Sbjct 1818 CATTCTCACT----TCTAAGCGCTCCACTTATCCTCTCGATTAAGCTTCTCCGCTCTTAG 1873 Query 178 GACGCTCCCCTACCCA-------ACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAA 230 |||||| |||||| || || || |||||| ||||| |||| Sbjct 1874 AACGCTCTCCTACCACGCGTATTACTACGCAT----CCACAGTTTCGGTACTATGCTTA- 1928 Query 231 GCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAA 290 |||||| || ||| ||||||| | ||||| ||| |||||||||||||||||||||| || Sbjct 1929 GCCCCGGTAAATTTTCGGCGCAGCGTCACTCGACTAGTGAGCTATTACGCACTCTTTTAA 1988 Query 291 GGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACT 350 |||||||||||| |||||||| |||| |||||||||||||||||||||||||| ||||| Sbjct 1989 TGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTACGCAACTCCACATCCTTTTCCACT 2048 Query 351 GAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || | || ||| ||||| ||| ||||||||||||||||||| ||| Sbjct 2049 TAGCATAGATTTTGGGACCTTAACTGGTGATCTGGGCTGTTTCCCTTTCG 2098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177506427904