Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq297 408 7e-112 >seq297 Length=3220 Score = 408 bits (452), Expect = 7e-112 Identities = 255/274 (93%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| |||||||| ||||||||| |||||| |||||||| |||| |||||||| ||||| Sbjct 320 GAGGGGGGCTTCGCACTTAGATGCTTTCAGCGCTTATCCCGTCCATACTTAGCTACCCAG 379 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 |||||| |||||| ||||||||| |||||| ||| ||||||||||||||||||||||| Sbjct 380 CTATGCCTTTGGCAAGACAACTGGTACACCAGCGGTATGTCCATCCCGGTCCTCTCGTAC 439 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct 440 TAAGGACAGCTCCTCTCAAATTTCCTGCGCCCACGACGGATAGGGACCGAACTGTCTCAC 499 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 500 GACGTTCTGAACCCAGCTCGCGTGCCGCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 559 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||||||||||||| ||||||||||||||| Sbjct 560 TACTTCAGCCCCAGGATGCGACGAGCCGACATCG 593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780739896456