Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq298 197 3e-48 >seq298 Length=2067 Score = 197 bits (218), Expect = 3e-48 Identities = 313/441 (71%), Gaps = 36/441 (8%) Strand=Plus/Minus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 |||||| | ||||| ||||||||| |||||||| | ||| |||||| |||||| |||| Sbjct 842 CTTTACGATCCGAAAACCTTCTTCACTCACGCGGCGTTGCTCCATCAGACTTGCGTCCAT 783 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 |||| || |||||| ||||||||||||||||||||| ||| |||||||||||| ||| || Sbjct 782 TGTGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTTTGGGCCGTGTCTCAGTCCCAATG 723 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||| | ||| |||||| | |||| | ||| | |||| ||| ||| ||||| || Sbjct 722 TGGCCGATCAGTCTCTCAACTCGGCTATGCATCATTGCCTTGGTAAGCCGTTACCTTACC 663 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCT----- 238 ||||||||||| | ||| ||||| |||||| | || |||| | | || | Sbjct 662 AACTAGCTAATGCACCGCGGGCCCATCCTTTAGTGACA-GCTCGAAAGCCGCCTTTCATA 604 Query 239 -CTT-------TGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCC-AGTGGTTATC 289 ||| | |||||| | |||| ||||||||| | |||||| ||||| |||| Sbjct 603 GCTTGAGCATGCGCTCTTGCTTC-TTATTTGGTATTAGCACCTGTTTCCAAGTGG-TATC 546 Query 290 CCCCTCCATCAGGCA-GTTTCCCAGACATTACTCACCCGTCCGCCACTCG--------TC 340 || | | |||| ||| |||| |||||||||| |||||| |||| || Sbjct 545 CCAAGCTAAAGGGCAGGTTGCCCACGTGTTACTCACCCATCCGCCGCTCGCGCTTTTATC 486 Query 341 AGCGAAGCAGCAAGCTGCTTCCTGTTA-------CCGTTCGACTTGCATGTGTTAGGCCT 393 | | | | ||| | |||| |||| || ||||||||||||| |||||| Sbjct 485 TTCCTACCCG-AAGGT-ATTCC-GTTAAAATTGCTCGCTCGACTTGCATGTATTAGGCAC 429 Query 394 GCCGCCAGCGTTCAATCTGAG 414 ||||||||||||| ||||| Sbjct 428 GCCGCCAGCGTTCGTCCTGAG 408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222302868096