Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq298 336 7e-90 >seq298 Length=2067 Score = 336 bits (372), Expect = 7e-90 Identities = 375/503 (75%), Gaps = 37/503 (7%) Strand=Plus/Plus Query 22 GAGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACC 81 |||||||||| ||||||||||| |||||| |||||||||| || ||||| || Sbjct 497 GAGCGGCGGATGGGTGAGTAACACGTGGGCAACCTGCCCTTTAGCTTGGGATACCACTTG 556 Query 82 GAAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGC--- 138 |||| ||||||||| | |||| | | | |||||| | | ||| |||| Sbjct 557 GAAACAGGTGCTAATACCAAATAAGAAGCAAG-AGCGCATGCTCAAGCTATGAAAGGCGG 615 Query 139 ---TCCGGCGGT----ACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGG 191 || || || | ||||| | |||||| |||||||||||||||||||||||| Sbjct 616 CTTTCGAGCTGTCACTAAAGGATGGGCCCGCGGTGCATTAGCTAGTTGGTAAGGTAACGG 675 Query 192 CTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAG 251 ||||||||||| | ||| ||||||| |||||| |||||||||||||||| |||||| Sbjct 676 CTTACCAAGGCAATGATGCATAGCCGAGTTGAGAGACTGATCGGCCACATTGGGACTGAG 735 Query 252 ACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCC 311 |||||| ||||||||||||||||||||||||| |||||| || |||||||| | ||| | Sbjct 736 ACACGGCCCAAACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCACAATGGACGCAAGTC 795 Query 312 TGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTG----TCCT 367 ||||| |||||||||||||||| || ||||| ||||| ||||||||||||| | | Sbjct 796 TGATGGAGCAACGCCGCGTGAGTGAAGAAGGTTTTCGGATCGTAAAGCTCTGTTGTTGGT 855 Query 368 CAAGGAAGATAA---------------------TGACGGTACTTGAGGAGGAAGCCCCGG 406 ||| | ||||| |||||||| | | || ||| | ||| Sbjct 856 GAAGAAGGATAAGGATAGTAACTGATTCTTATTTGACGGTAATCAACCAGAAAGTCACGG 915 Query 407 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTG 466 ||||||||||||||||||||||||||||||||||| ||| |||||| |||||| ||| | Sbjct 916 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGATTTA-TT 974 Query 467 GGGCGTAAAGGGTGCGTAGGTGG 489 |||||||||| | || ||| || Sbjct 975 GGGCGTAAAGCGAACGCAGGCGG 997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497481000704