Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2812 232 1e-58 seq327 98.7 2e-18 >seq2812 Length=11703 Score = 232 bits (256), Expect = 1e-58 Identities = 209/258 (81%), Gaps = 6/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||| || ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 2358 CTTCTTAGAGGAACAGGCGGCTTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 2301 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| || || || ||| Sbjct 2300 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGTTTT--- 2244 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || |||||| |||| | |||||| | | || ||| ||||||| ||||| | | ||| Sbjct 2243 CCCTGGCCGAAAGGCCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGGATTGGGGCTTG 2184 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 2183 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 2124 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 2123 ACGTCCCTGCCCTTTGTA 2106 >seq327 Length=86727 Score = 98.7 bits (108), Expect = 2e-18 Identities = 185/262 (71%), Gaps = 24/262 (9%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTA-TCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||| || | | | || ||||| || | | ||| |||||||||||||||| Sbjct 72588 CTTCTTAGAGGAACAAGTAGTTTCTAGCCGCACGA-GATCGAG-CAATAACAGGTCTGTG 72645 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||| ||||||| |||||| || |||| | || |||| || || || || | Sbjct 72646 ATGTCCTTAGACGTTCTGAGCTGCACACTCG-----CTGAAGGAATCAGCGTGT---TTT 72697 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG--TCGTGCTGGGGATAGAGCAT 248 || |||| | || ||| || ||| || | | || |||| |||||| ||||| | Sbjct 72698 CCCTGGCTGAAAAGTCCGGATAA-CTCGCTGAA-TCTGCTTCGTGC------TAGAGACT 72749 Query 249 TGCAATTATTGCTCTTCAA--CGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 | ||||||| | | || |||||||| || ||||| | | ||||| ||| |||||| Sbjct 72750 TATAATTATTCGCCATGAATTCGAGGAATTCC-AGTAAACAAGAGTCATAAGCTCGCGTT 72808 Query 307 GATTACGTCCCTGCCCTTTGTA 328 ||||| |||||| |||||| || Sbjct 72809 GATTATGTCCCTACCCTTTCTA 72830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947124735488