Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq297 316 7e-84 >seq297 Length=3220 Score = 316 bits (350), Expect = 7e-84 Identities = 412/566 (73%), Gaps = 14/566 (2%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||| |||| |||||||||||||||||||| | | |||||||| ||||| || Sbjct 728 TCGAGTTGTCGCTCTCGCAGTCAAGCTCCCTTATACCTTTACACTCTGTGAATGATTTCC 787 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||||| ||||||||||||||||||||||||||||| ||| ||||| | |||||||||| Sbjct 788 AACCATTCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTAGGAGG-CGACCGCCCCAG 846 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGAT-ATCCA 179 | ||||| ||| | | ||||||||| || | | | |||| ||||||| | ||| Sbjct 847 TCAAACTGCCCGTCTGACACTGTCCCATGCCTCGCTTAGAGGCCCTGGTTAGAGCAGCCA 906 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 | || || |||| ||||| | ||| | ||| |||| | || | Sbjct 907 TCAAACA-AGGGTAGTATCCCAACATTGCCTCTGATAATACTGGCGTACTATCTTCTCTG 965 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 |||| ||||||||| ||| || | |||||| ||| | ||| ||| ||| Sbjct 966 GCTCCTACCTATCCTGTACATGTTTAACAGCTGCCCAATATCAAATTGCAGTAAAGCTCC 1025 Query 300 C-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 ||||||||| ||||||| |||| | ||| ||||||| || ||| | ||||||||| Sbjct 1026 ATGGGGTCTTTCCGTCCTGTCGCGGGTAACCCGCATCTTCACGGGTATTATAATTTCACC 1085 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418 | | || | |||||||||| | || |||| || |||||||||||||||||||||| Sbjct 1086 GAGTCTCTCGTTGAGACAGTGCCCAAATCATTACACCTTTCGTGCAGGTCGGAACTTACC 1145 Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 1146 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 1205 Query 479 CAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACC 538 || || | || || | || ||| || || ||||||||||||||||| Sbjct 1206 CAGTTCGCTGCTTCGCTTAC----------GCTTACAGCTCTCCTTAACCTTCCAGCACC 1255 Query 539 GGGCAGGCGTCAGTCCGTATACCTCG 564 ||||||| ||||| || ||||| ||| Sbjct 1256 GGGCAGGTGTCAGCCCCTATACGTCG 1281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702264727296