Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2812 412 1e-112 seq327 178 4e-42 >seq2812 Length=11703 Score = 412 bits (456), Expect = 1e-112 Identities = 421/545 (77%), Gaps = 47/545 (9%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| | || | | ||| || ||||| ||||| | ||||||||| Sbjct 3301 GTACTCATTCCGATTACGGGGCCTCGGATGAGTCCCGTATCGTTATTTTTCGTCACTACC 3360 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct 3361 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCTGT 3420 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 3421 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACCATGGT 3480 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG-- 237 |||| | ||||||||||| |||||||| |||||| ||||||| || | |||||| Sbjct 3481 AGGCGCAGAACCTACCATCGACAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGGT 3540 Query 238 GCT-CAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACC------AAGGAGCCCCG 288 ||| | | ||||||||| | |||||||| || ||||| || || || Sbjct 3541 GCTAGATGACCATGCGATCAGCACAAAGTTATTCAGAGTCACCAAAACAAACGATGGACG 3600 Query 289 AAGGG----------------CGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGT 332 || || || | | |||| |||||||||| || || ||| | | Sbjct 3601 AACGGACGAGCCGTCCGCCACCGATTGGTTTTGATCTAATAAAAGCATTCC-TCCCATCT 3659 Query 333 CGGGG-------TTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA 385 | | | | || |||||||||||||||||||||||||| |||||||| ||| | Sbjct 3660 CTGAGAGGAATTCTGTTTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTA--A 3717 Query 386 AGGT----ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 | || || ||| ||| ||| ||||||||||||||||||||||||| ||||||| || Sbjct 3718 ATGTGTCCACGATCTAATGAACCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTA 3777 Query 442 TAGATT--GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACT 499 ||| || | |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 3778 ---ATTCGGCATGTACTGAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACT 3834 Query 500 GGCAG 504 ||||| Sbjct 3835 GGCAG 3839 >seq327 Length=86727 Score = 178 bits (196), Expect = 4e-42 Identities = 175/225 (78%), Gaps = 12/225 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| |||||| | || | || ||| | ||||| ||||| |||||||| || Sbjct 69164 GTACTCATTCCGATTACAGGGCCTCGAATGAGTCTCGTATCGTTATTTTTTGTCACTGCC 69105 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 | |||||| ||| | |||||||||||| ||||||||||||||||||||||| ||||| || Sbjct 69104 TTCCCGTGCCGG-AGTGGGTAATTTGCACGCCTGCTGCCTTCCTTGGATGTAGTAGCTGT 69046 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||| |||||| ||||| ||||||||| ||||||| |||| |||||| | Sbjct 69045 TTCTTAGGCTCTCTCTCAGGAATCGAA----------CCGTTACTCGTTACAACCATGAT 68996 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAA 224 || | | ||||| ||||| | |||||| |||| | ||||||| Sbjct 68995 AGACGCAGAACCTACTATCGACAATTGATAAGGCAAACATTTGAA 68951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510279983616