Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2024 107 2e-18 >seq2024 Length=8919894 Score = 107 bits (118), Expect = 2e-18 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 61184 GTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCA 61243 ||||| ||||||| || ||||| || || || ||||| || || || || || |||| Sbjct 2396797 GTGAAAAACATTTTATATCTCATGTCTTAGCATTTTTTGCAGCATCTGATGGAATTGTCA 2396738 Query 61244 ATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCT 61303 |||||||| | | ||||| || || || || ||| | | ||||| |||||||||| Sbjct 2396737 ATGAGAATCTTGTTGAACGATTTAGTCAAGAAGTACAAATAACAGAGGCACGTTGTTTCT 2396678 Query 61304 ACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATA 61363 | || || || |||||||||| ||||| || || || ||||| | | | || |||| Sbjct 2396677 ATGGTTTTCAAGTTGCCATGGAAAATGTTCATTCAGAAATGTATTCTTTGTTAATTGATA 2396618 Query 61364 CGTACAT 61370 ||||||| Sbjct 2396617 CGTACAT 2396611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397529498769440