Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq114 109 2e-21 >seq114 Length=53040 Score = 109 bits (120), Expect = 2e-21 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 || |||||||| ||| || |||| | |||| | || |||||| | | ||||| ||||||| Sbjct 28666 GATTCGAGTTGCTTGAGAGTGCAACCCTAAGTAGGTGGTAAACTCCATCTAAGGCTAAAT 28607 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | | ||||||||||||| |||| || |||| ||||| ||||||| |||| | | Sbjct 28606 ACTACCATGAGACCGATAGCGAACAAATATCGTGAGGGAAAGTTGAAAAGAACTTAGAAG 28547 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || | |||||||| Sbjct 28546 AGAGAGTTCAAGATTACGTGAAA 28524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079885864550