Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq114 271 1e-70 seq167 78.8 2e-12 >seq114 Length=53040 Score = 271 bits (300), Expect = 1e-70 Identities = 213/253 (84%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||||||||||||||||||||||||||||| |||||| |||| ||||||||| |||||| Sbjct 15584 GTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTTTAAATCCAGCTCACATTCCCT 15643 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 || ||||||| ||||| ||| || |||||||||||||| |||||||||||| || Sbjct 15644 GTTGACGGGTGAAAAATCCGACGTTTGACGAATTCTGCTTCGCAATGATAGGAAGAATCG 15703 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 ||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct 15704 ACAACGAAGGATCAAAAAGCGACGTCGCTATGAATGCTTGGCTGCCACAAGCCAGTTATC 15763 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA--TTTCGAGGGACTAAAGGATCGAT 267 |||||| ||||||||||| ||| ||| || ||| ||| | | | |||| |||||| Sbjct 15764 CCTGTGATAACTTTTCTGACACTTCTTGCTGAAAACTCTTCAA--GCCAAAAGAATCGAT 15821 Query 268 AGGCCACACTTTC 280 || || ||||| Sbjct 15822 AGACCGTGCTTTC 15834 >seq167 Length=42661 Score = 78.8 bits (86), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 9/111 (8%) Strand=Plus/Plus Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC---AACGTCG 176 |||||||||||| ||||||| || | ||||||||||||||| ||||| | | |||| Sbjct 34299 AATTCTGCTTCGCAATGATAGAAAAAACCGACATCGAAGGATTAAAAAACGATGAAGTCG 34358 Query 177 CTATGAACGCTTGGCTGCCACAAGCCAG-TTATCCCTGTGGTAA--CTTTT 224 ||||||| ||| |||| ||||||| |||| | | |||||| ||||| Sbjct 34359 CTATGAAGTCTT---AGCCAAAAGCCAGTTTATTCTTATGGTAATCCTTTT 34406 Score = 73.4 bits (80), Expect = 7e-11 Identities = 71/90 (79%), Gaps = 6/90 (7%) Strand=Plus/Plus Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC---AACGTCG 176 |||||||||||| ||||||| || |||||||||| |||||| ||||| | | |||| Sbjct 30335 AATTCTGCTTCGCAATGATAGAAAAAGCCGACATCAAAGGATTAAAAAACGATGAAGTCG 30394 Query 177 CTATGAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||| ||| |||| ||||||||| Sbjct 30395 CTATGAAGTCTT---AGCCAAAAGCCAGTT 30421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854354537376