Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq114 194 5e-47 seq167 96.9 1e-17 seq124 96.9 1e-17 seq51 87.8 6e-15 seq181 84.2 7e-14 seq362 82.4 2e-13 seq137 78.8 3e-12 seq44 77.0 1e-11 seq3951 75.2 4e-11 seq612 75.2 4e-11 seq384 75.2 4e-11 seq195 75.2 4e-11 seq146 75.2 4e-11 >seq114 Length=53040 Score = 194 bits (214), Expect = 5e-47 Identities = 157/189 (83%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG-CTCCCAC 243 || |||||||| ||||||| | ||||||||||||||| ||| | || ||||||| Sbjct 16116 GAGTAAGTAAAGAAACGATGAAAGTAGTGGTATTTCACCGGCGATGTTACCATCTCCCAC 16175 Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 |||| |||||||||||| ||| || |||| | | |||||||||||||||||||||||| Sbjct 16176 TTATGCTACACCTCTCATGTCTCTTTACAATGCCAGACTAGAGTCAAGCTCAACAGGGTT 16235 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 || |||||||||| ||| |||| ||||||| |||||| |||||||||||||| ||||| Sbjct 16236 TTGTTTCCCCGCTAATTTTTCCAAACCCGTTCTCTTGGCAGTGGTTTCGCTAGAAAGTAG 16295 Query 364 ATAGGGACA 372 ||||||||| Sbjct 16296 ATAGGGACA 16304 Score = 100 bits (110), Expect = 9e-19 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| ||||||| ||| |||| ||||||| |||||||||||| Sbjct 15881 CTTTTGCTCTACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGTCACCTGCGTTATT 15940 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATC 116 ||| |||||||| ||||||||| |||||||||| ||| || | || || Sbjct 15941 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGTCTGGCAGTATCCTC 15990 Score = 96.9 bits (106), Expect = 1e-17 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 375 GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 21750 GGGAATCTCGTTTATCCATTCATGCGCGTCACTAATTAGATGACAAGGCATTTGGCTA 21807 >seq167 Length=42661 Score = 96.9 bits (106), Expect = 1e-17 Identities = 121/160 (76%), Gaps = 6/160 (4%) Strand=Plus/Plus Query 282 TAGAGTCAAGCTCAACAGGG-TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTG 340 ||||||||| | |||| || |||||||||| || ||| |||| | ||||||| Sbjct 34713 TAGAGTCAAATTTAACAAGGATCTTCTTTCCTGACTAATTTTTCCAAACTTATTCCCTTT 34772 Query 341 GCT-GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399 | | || ||||| ||||| | | |||| |||| |||||||| ||||| || |||||| Sbjct 34773 GTTAGTAGTTTCACTAGAAAATTAATAG--ACAGAGGGAATCTTATTAATTCACTCATGC 34830 Query 400 GCGTCACTAA-TTAGATGACGAGGCATTTGGCTACCTTAA 438 | ||||||| || |||||||| |||||||||| ||||| Sbjct 34831 ACCTCACTAAATTGGATGACGAAACATTTGGCTA-CTTAA 34869 >seq124 Length=25221 Score = 96.9 bits (106), Expect = 1e-17 Identities = 104/136 (76%), Gaps = 5/136 (4%) Strand=Plus/Minus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCT-GTGGTTTCGCTAG 356 ||| |||||||||| || | ||| |||| || ||||||| | | || ||||| ||| Sbjct 6082 AGGATCTTCTTTCCTCGTTAATTTTTCCAAACCTATTCCCTTTGTTAGTAGTTTCATTAG 6023 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 | | |||| ||||| |||||||| |||||||||||||| | ||||||||| |||| Sbjct 6022 AAAATAGA----GACAGAGGGAATCTTATTAATCCATTCATGTACATCACTAATTGGATG 5967 Query 417 ACGAGGCATTTGGCTA 432 |||| |||| ||||| Sbjct 5966 ACGAAACATTCGGCTA 5951 >seq51 Length=109628 Score = 87.8 bits (96), Expect = 6e-15 Identities = 116/157 (74%), Gaps = 3/157 (2%) Strand=Plus/Minus Query 279 GACTAGAGTCAAGCTCAACAGGG-TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCC 337 ||||||| | || | |||| | |||||||||| |||| ||| ||||||| ||||| Sbjct 101910 GACTAGAATTAAATTTAACAAGAATCTTCTTTCCTCGCTAATTTTTCCAAGCCTATTCCC 101851 Query 338 TTGGCTG-TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATC-CATTC 395 || | | | |||| |||| | || ||| ||||| ||||| | |||||| || || Sbjct 101850 TTTGTTAATAGTTTTATTAGAAAATAAATAAAGACAGAAGGAATTTTATTAATCTCACTC 101791 Query 396 ATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||| ||||||||||| ||||||| |||||||||| Sbjct 101790 ATGTACGTCACTAATTGAATGACGAAACATTTGGCTA 101754 >seq181 Length=49486 Score = 84.2 bits (92), Expect = 7e-14 Identities = 116/157 (74%), Gaps = 4/157 (3%) Strand=Plus/Plus Query 279 GACTAGAGTCAAGCTCAACAGGG-TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCC 337 ||||||| | || | |||| | |||||||||| |||| ||| ||||||| ||||| Sbjct 21221 GACTAGAATTAAATTTAACAAGAATCTTCTTTCCTCGCTAATTTTTCCAAGCCTATTCCC 21280 Query 338 TTGGCTG-TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATC-CATTC 395 || | | | |||| |||| | || |||| |||| ||||| | |||||| || | Sbjct 21281 TTTGTTAATAGTTTTA-TAGAAAATAAATAGAAACAGAAGGAATTTTATTAATCTCACTT 21339 Query 396 ATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||| ||||||||||| |||||||| |||||||||| Sbjct 21340 ATGTACGTCACTAATTGGATGACGAAACATTTGGCTA 21376 >seq362 Length=4171 Score = 82.4 bits (90), Expect = 2e-13 Identities = 125/173 (72%), Gaps = 4/173 (2%) Strand=Plus/Plus Query 263 TCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG-TCTTCTTTCCCCGCTGATTC 321 |||| | | || | | ||||||| | || | |||| | |||||||||| |||| ||| Sbjct 2616 TCATCTTATAATGCCAGACTAGAATTAAATTTAACAAGAATCTTCTTTCCTCGCTAATTT 2675 Query 322 CGCCAAGCCCGTTCCCTTGGCTG-TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAAT 380 ||||||| ||||||| | | | |||| |||| | || |||| |||| ||||| Sbjct 2676 TTCCAAGCCTATTCCCTTTGTTAATAGTTTTA-TAGAAAATAAATAGAAACAGAAGGAAT 2734 Query 381 CTCGTTAATC-CATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 | |||||| || | ||| ||||||||||| |||||||| ||||| |||| Sbjct 2735 TTTATTAATCTCACTTATGTACGTCACTAATTGGATGACGAAACATTTAGCTA 2787 >seq137 Length=95548 Score = 78.8 bits (86), Expect = 3e-12 Identities = 141/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 238 TCCCACTTATTCTACA--CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295 || ||||||| ||| | | ||| | ||| | | | || | | ||||||| | || | | Sbjct 34441 TCTCACTTATACTATAGTCTTCT-ATGTCTTCTTATAATGCCAGACTAGAATTAAATTTA 34499 Query 296 ACAGGG-TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG-TGGTTTCGC 353 ||| | |||||||||| |||| ||| ||||| | || |||| | | | |||| Sbjct 34500 ACAAGAATCTTCTTTCCTCGCTAATTTTTCCAAGTCTATTTCCTTTGTTAATAGTTTTAT 34559 Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATC-CATTCATGCGCGTCACTAATTA 412 |||| | || |||| ||||| ||||| | | |||| || | ||| ||||||||||| Sbjct 34560 TAGAAAATAAATAGAGACAGAAGGAATTTTATCAATCTCACTTATGTACGTCACTAATTG 34619 Query 413 GATGACGAGGCATTTGGCTA 432 ||||||| |||||||||| Sbjct 34620 GATGACGCAACATTTGGCTA 34639 >seq44 Length=134332 Score = 77.0 bits (84), Expect = 1e-11 Identities = 135/194 (70%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 241 CACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGG 300 ||||||| ||||| | | | || | | || | | ||||||||| || | |||| | Sbjct 108795 CACTTATACTACAGTTTTTATATCTTCCAATAATGCCAGACTAGAGTTAAATTTAACAAG 108736 Query 301 G-TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG-TGGTTTCGCTAGAT 358 | | ||| || | || ||| |||||| ||||||| | | | ||| || | Sbjct 108735 GATTTTCCTTTCTAACTAATTTTTCCAAGCTTATTCCCTTTGTTAATAATTTTATTAAAA 108676 Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 | || |||| |||| ||||||| |||||||| ||||| ||||||||||| |||||| Sbjct 108675 AATAAATAGAGACAAAAGGAATCTTATTAATCCACTCATGTACGTCACTAATTGGATGAC 108616 Query 419 GAGGCATTTGGCTA 432 || |||||||||| Sbjct 108615 GAAACATTTGGCTA 108602 >seq3951 Length=47031 Score = 75.2 bits (82), Expect = 4e-11 Identities = 113/157 (72%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 279 GACTAGAGTCAAGCTCAACAGGG-TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCC 337 ||||||| | || | |||| | |||||||||| |||| ||| ||||| | || || Sbjct 35905 GACTAGAATTAAATTTAACAAGAATCTTCTTTCCTCGCTAATTTTTCCAAGTCTATTTCC 35964 Query 338 TTGGCTG-TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATC-CATTC 395 || | | | |||| |||| | || |||| ||||| ||||| | | |||| || | Sbjct 35965 TTTGTTAATAGTTTTATTAGAAAATAAATAGAGACAGAAGGAATTTTATCAATCTCACTT 36024 Query 396 ATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||| ||||||||||| ||||||| |||||||||| Sbjct 36025 ATGTACGTCACTAATTGGATGACGCAACATTTGGCTA 36061 >seq612 Length=1149 Score = 75.2 bits (82), Expect = 4e-11 Identities = 110/152 (72%), Gaps = 3/152 (2%) Strand=Plus/Plus Query 279 GACTAGAGTCAAGCTCAACAGGG-TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCC 337 ||||||| | || | |||| | |||||||||| |||| ||| ||||| | ||||| Sbjct 998 GACTAGAATTAAATTTAACAAGAATCTTCTTTCCTCGCTAATTTTTCCAAGTCTATTCCC 1057 Query 338 TTGGCTG-TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATC-CATTC 395 || | | | |||| |||| | || ||| |||| ||||| | |||||| || || Sbjct 1058 TTTGTTAATAGTTTTATTAGAAAATAAATAAAAACAGAAGGAATTTTATTAATCTCACTC 1117 Query 396 ATGCGCGTCACTAATTAGATGACGAGGCATTT 427 ||| ||||||||||| |||||||| ||||| Sbjct 1118 ATGTACGTCACTAATTGGATGACGAAACATTT 1149 >seq384 Length=17044 Score = 75.2 bits (82), Expect = 4e-11 Identities = 113/157 (72%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 279 GACTAGAGTCAAGCTCAACAGGG-TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCC 337 ||||||| | || | |||| | |||||||||| |||| ||| ||||| | || || Sbjct 6552 GACTAGAATTAAATTTAACAAGAATCTTCTTTCCTCGCTAATTTTTCCAAGTCTATTTCC 6611 Query 338 TTGGCTG-TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATC-CATTC 395 || | | | |||| |||| | || |||| ||||| ||||| | | |||| || | Sbjct 6612 TTTGTTAATAGTTTTATTAGAAAATAAATAGAGACAGAAGGAATTTTATCAATCTCACTT 6671 Query 396 ATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||| ||||||||||| ||||||| |||||||||| Sbjct 6672 ATGTACGTCACTAATTGGATGACGCAACATTTGGCTA 6708 >seq195 Length=31960 Score = 75.2 bits (82), Expect = 4e-11 Identities = 74/90 (82%), Gaps = 7/90 (8%) Strand=Plus/Minus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 |||||||||||||||||||||||| || || |||||| ||| |||| ||||| | Sbjct 31950 GACTAGAGTCAAGCTCAACAGGGT-TTGTT--CCCGCTAATT-TTCCAAACCCGT--CTC 31897 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGG 368 |||| |||| ||||||||| |||||||||| Sbjct 31896 TGGCAGTGG-TTCGCTAGAAAGTAGATAGG 31868 >seq146 Length=52165 Score = 75.2 bits (82), Expect = 4e-11 Identities = 113/157 (72%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 279 GACTAGAGTCAAGCTCAACAGGG-TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCC 337 ||||||| | || | |||| | |||||||||| |||| ||| ||||| | || || Sbjct 22697 GACTAGAATTAAATTTAACAAGAATCTTCTTTCCTCGCTAATTTTTCCAAGTCTATTTCC 22756 Query 338 TTGGCTG-TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATC-CATTC 395 || | | | |||| |||| | || |||| ||||| ||||| | | |||| || | Sbjct 22757 TTTGTTAATAGTTTTATTAGAAAATAAATAGAGACAGAAGGAATTTTATCAATCTCACTT 22816 Query 396 ATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||| ||||||||||| ||||||| |||||||||| Sbjct 22817 ATGTACGTCACTAATTGGATGACGCAACATTTGGCTA 22853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635112991008