Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq4 71.6 1e-10 seq1 71.6 1e-10 >seq4 Length=64497 Score = 71.6 bits (78), Expect = 1e-10 Identities = 90/124 (73%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||| | ||||||||| ||||||||||||||||| ||| || | | | ||| Sbjct 29411 CCCTACTGCTACCTTGTTACGACTTCACCCCAGTCACTGATCCCACTTTAAATAACTCCC 29352 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||| | ||||| | | |||| || |||| | |||||||| ||||||||| ||| Sbjct 29351 TCCTTACGGTTAGGTCATTAGCTTCGAGTGAAACCAATTCCCATGGCGTGACGGGCAGTG 29292 Query 135 TGTA 138 |||| Sbjct 29291 TGTA 29288 >seq1 Length=2798100 Score = 71.6 bits (78), Expect = 1e-10 Identities = 90/124 (73%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||| | ||||||||| ||||||||||||||||| ||| || | | | ||| Sbjct 1538971 CCCTACTGCTACCTTGTTACGACTTCACCCCAGTCACTGATCCCACTTTAAATAACTCCC 1539030 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||| | ||||| | | |||| || |||| | |||||||| ||||||||| ||| Sbjct 1539031 TCCTTACGGTTAGGTCATTAGCTTCGAGTGAAACCAATTCCCATGGCGTGACGGGCAGTG 1539090 Query 135 TGTA 138 |||| Sbjct 1539091 TGTA 1539094 Score = 71.6 bits (78), Expect = 1e-10 Identities = 90/124 (73%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||| | ||||||||| ||||||||||||||||| ||| || | | | ||| Sbjct 2431761 CCCTACTGCTACCTTGTTACGACTTCACCCCAGTCACTGATCCCACTTTAAATAACTCCC 2431702 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||| | ||||| | | |||| || |||| | |||||||| ||||||||| ||| Sbjct 2431701 TCCTTACGGTTAGGTCATTAGCTTCGAGTGAAACCAATTCCCATGGCGTGACGGGCAGTG 2431642 Query 135 TGTA 138 |||| Sbjct 2431641 TGTA 2431638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345593208960