Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 4e-17 >seq1 Length=2798100 Score = 93.3 bits (102), Expect = 4e-17 Identities = 132/179 (74%), Gaps = 14/179 (8%) Strand=Plus/Plus Query 10 TGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGA 69 ||||||||| ||| | ||||||| |||||||||| | ||||||| ||||| |||| | Sbjct 1122474 TGGATGCCTTGGCGTTAAGAGGCGATGAAGGACGTGGCAGGCTGCGATAAGCTGCGGGTA 1122533 Query 70 -TTGGCACATACGAATTG--ATCCGTAGATATCCGAATGGGGCAACCCGA-TATATTGG- 124 ||| || || |||| ||||| |||| ||||||||||| ||||| | || || | Sbjct 1122534 ATTGTCA---ACAAATTCTAATCCGCAGATTTCCGAATGGGGAAACCCAACTAGCTTAGC 1122590 Query 125 -AGATATATCATAACGCTAGG--CGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 || ||| |||| ||| | || | || ||| ||| ||||||||| ||||||||| Sbjct 1122591 TAGTTATTACATA---CTAAGTATGTAAAGCAAACTTGGTGAACTGAAATATCTAAGTA 1122646 Score = 93.3 bits (102), Expect = 4e-17 Identities = 132/179 (74%), Gaps = 14/179 (8%) Strand=Plus/Minus Query 10 TGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGA 69 ||||||||| ||| | ||||||| |||||||||| | ||||||| ||||| |||| | Sbjct 2122188 TGGATGCCTTGGCGTTAAGAGGCGATGAAGGACGTGGCAGGCTGCGATAAGCTGCGGGTA 2122129 Query 70 -TTGGCACATACGAATTG--ATCCGTAGATATCCGAATGGGGCAACCCGA-TATATTGG- 124 ||| || || |||| ||||| |||| ||||||||||| ||||| | || || | Sbjct 2122128 ATTGTCA---ACAAATTCTAATCCGCAGATTTCCGAATGGGGAAACCCAACTAGCTTAGC 2122072 Query 125 -AGATATATCATAACGCTAGG--CGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 || ||| |||| ||| | || | || ||| ||| ||||||||| ||||||||| Sbjct 2122071 TAGTTATTACATA---CTAAGTATGTAAAGCAAACTTGGTGAACTGAAATATCTAAGTA 2122016 Score = 93.3 bits (102), Expect = 4e-17 Identities = 132/179 (74%), Gaps = 14/179 (8%) Strand=Plus/Minus Query 10 TGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGA 69 ||||||||| ||| | ||||||| |||||||||| | ||||||| ||||| |||| | Sbjct 2786289 TGGATGCCTTGGCGTTAAGAGGCGATGAAGGACGTGGCAGGCTGCGATAAGCTGCGGGTA 2786230 Query 70 -TTGGCACATACGAATTG--ATCCGTAGATATCCGAATGGGGCAACCCGA-TATATTGG- 124 ||| || || |||| ||||| |||| ||||||||||| ||||| | || || | Sbjct 2786229 ATTGTCA---ACAAATTCTAATCCGCAGATTTCCGAATGGGGAAACCCAACTAGCTTAGC 2786173 Query 125 -AGATATATCATAACGCTAGG--CGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 || ||| |||| ||| | || | || ||| ||| ||||||||| ||||||||| Sbjct 2786172 TAGTTATTACATA---CTAAGTATGTAAAGCAAACTTGGTGAACTGAAATATCTAAGTA 2786117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476790318576