Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq4 277 5e-72 seq1 277 5e-72 >seq4 Length=64497 Score = 277 bits (306), Expect = 5e-72 Identities = 302/400 (76%), Gaps = 2/400 (1%) Strand=Plus/Plus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||| ||| | |||||||| |||||||||||||||||||||||| || | || |||||| Sbjct 28387 AGAAGAAGTCCTGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTT 28446 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 | ||||||||| ||||||||||| | ||| |||| | |||| | ||||||||| Sbjct 28447 ATTCGGAATTATTGGGCGTAAAGGGCGCGTAGGCTGACTAATAAGTTAAAAGTGAAATCC 28506 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 | |||||||||| |||||||| ||| |||| |||||| || ||||| | Sbjct 28507 CGAGGCTTAACCTTGGAATTGCTTTTAAAACTGTTAATCTAGAGATTGAAAGAGGATAGA 28566 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||||| |||||| || |||| |||| |||| |||||||||||| |||||||||| Sbjct 28567 GGAATTCCTAGTGTAGAGGTAAAATTCGTAAATATTAGGAGGAACACCAGTGGCGAAGGC 28626 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 | |||| || |||||||| | || |||| |||||||||||||||||||||||| Sbjct 28627 GTCTATCTGGTTCAAATCTGACGCTGAGGCGCGAAGGCGTGGGGAGCAAACAGGATTAGA 28686 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTGG 369 |||||||||||||||||| |||||||| || | | || ||||| || || | Sbjct 28687 TACCCTGGTAGTCCACGCTGTAAACGATGAATGTTAAATATGGGAAATTTATTTTCT--G 28744 Query 370 TAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || ||||||||||| || ||||||||||| ||| Sbjct 28745 TATTACAGCTAACGCGTTAAACATTCCGCCTGGGGACTAC 28784 >seq1 Length=2798100 Score = 277 bits (306), Expect = 5e-72 Identities = 302/400 (76%), Gaps = 2/400 (1%) Strand=Plus/Minus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||| ||| | |||||||| |||||||||||||||||||||||| || | || |||||| Sbjct 1539995 AGAAGAAGTCCTGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTT 1539936 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 | ||||||||| ||||||||||| | ||| |||| | |||| | ||||||||| Sbjct 1539935 ATTCGGAATTATTGGGCGTAAAGGGCGCGTAGGCTGACTAATAAGTTAAAAGTGAAATCC 1539876 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 | |||||||||| |||||||| ||| |||| |||||| || ||||| | Sbjct 1539875 CGAGGCTTAACCTTGGAATTGCTTTTAAAACTGTTAATCTAGAGATTGAAAGAGGATAGA 1539816 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||||| |||||| || |||| |||| |||| |||||||||||| |||||||||| Sbjct 1539815 GGAATTCCTAGTGTAGAGGTAAAATTCGTAAATATTAGGAGGAACACCAGTGGCGAAGGC 1539756 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 | |||| || |||||||| | || |||| |||||||||||||||||||||||| Sbjct 1539755 GTCTATCTGGTTCAAATCTGACGCTGAGGCGCGAAGGCGTGGGGAGCAAACAGGATTAGA 1539696 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTGG 369 |||||||||||||||||| |||||||| || | | || ||||| || || | Sbjct 1539695 TACCCTGGTAGTCCACGCTGTAAACGATGAATGTTAAATATGGGAAATTTATTTTCT--G 1539638 Query 370 TAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || ||||||||||| || ||||||||||| ||| Sbjct 1539637 TATTACAGCTAACGCGTTAAACATTCCGCCTGGGGACTAC 1539598 Score = 277 bits (306), Expect = 5e-72 Identities = 302/400 (76%), Gaps = 2/400 (1%) Strand=Plus/Plus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||| ||| | |||||||| |||||||||||||||||||||||| || | || |||||| Sbjct 2430737 AGAAGAAGTCCTGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTT 2430796 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 | ||||||||| ||||||||||| | ||| |||| | |||| | ||||||||| Sbjct 2430797 ATTCGGAATTATTGGGCGTAAAGGGCGCGTAGGCTGACTAATAAGTTAAAAGTGAAATCC 2430856 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 | |||||||||| |||||||| ||| |||| |||||| || ||||| | Sbjct 2430857 CGAGGCTTAACCTTGGAATTGCTTTTAAAACTGTTAATCTAGAGATTGAAAGAGGATAGA 2430916 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||||| |||||| || |||| |||| |||| |||||||||||| |||||||||| Sbjct 2430917 GGAATTCCTAGTGTAGAGGTAAAATTCGTAAATATTAGGAGGAACACCAGTGGCGAAGGC 2430976 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 | |||| || |||||||| | || |||| |||||||||||||||||||||||| Sbjct 2430977 GTCTATCTGGTTCAAATCTGACGCTGAGGCGCGAAGGCGTGGGGAGCAAACAGGATTAGA 2431036 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTGG 369 |||||||||||||||||| |||||||| || | | || ||||| || || | Sbjct 2431037 TACCCTGGTAGTCCACGCTGTAAACGATGAATGTTAAATATGGGAAATTTATTTTCT--G 2431094 Query 370 TAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || ||||||||||| || ||||||||||| ||| Sbjct 2431095 TATTACAGCTAACGCGTTAAACATTCCGCCTGGGGACTAC 2431134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289572969984