Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq1 141 1e-31 >seq1 Length=2798100 Score = 141 bits (156), Expect = 1e-31 Identities = 182/247 (74%), Gaps = 12/247 (5%) Strand=Plus/Minus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||||| ||||||||||||||||| || ||||| || ||||| | | || ||| Sbjct 1124213 TTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTTA-CATGTTTGCAGA 1124155 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 | ||||||||||||||||||||||||| | | ||||| | || ||||| |||| Sbjct 1124154 GTCCTGTGTTTTTAGTAAACAGTCGCTACTCCCTATTTTGTG------CCACCTACTCA- 1124102 Query 122 CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAAT 181 || | | |||| || ||||||| |||||||||| || | |||||||| | Sbjct 1124101 -TAGTTGCCTAAAAGCA--GGTTACCCTTCTTCCGAAGTTACAGGTATAATTTGCCGAGT 1124045 Query 182 TCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTT 241 ||||| | || ||| | ||| ||||||||| |||||| | ||| ||||||||| Sbjct 1124044 TCCTTCAACATCATTCTTTC-AACACCTTAGTATACTCTACTCATCTACCAGTGTCGGTT 1123986 Query 242 TACGGTA 248 ||||||| Sbjct 1123985 TACGGTA 1123979 Score = 141 bits (156), Expect = 1e-31 Identities = 182/247 (74%), Gaps = 12/247 (5%) Strand=Plus/Plus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||||| ||||||||||||||||| || ||||| || ||||| | | || ||| Sbjct 2120449 TTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTTA-CATGTTTGCAGA 2120507 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 | ||||||||||||||||||||||||| | | ||||| | || ||||| |||| Sbjct 2120508 GTCCTGTGTTTTTAGTAAACAGTCGCTACTCCCTATTTTGTG------CCACCTACTCA- 2120560 Query 122 CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAAT 181 || | | |||| || ||||||| |||||||||| || | |||||||| | Sbjct 2120561 -TAGTTGCCTAAAAGCA--GGTTACCCTTCTTCCGAAGTTACAGGTATAATTTGCCGAGT 2120617 Query 182 TCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTT 241 ||||| | || ||| | ||| ||||||||| |||||| | ||| ||||||||| Sbjct 2120618 TCCTTCAACATCATTCTTTC-AACACCTTAGTATACTCTACTCATCTACCAGTGTCGGTT 2120676 Query 242 TACGGTA 248 ||||||| Sbjct 2120677 TACGGTA 2120683 Score = 141 bits (156), Expect = 1e-31 Identities = 182/247 (74%), Gaps = 12/247 (5%) Strand=Plus/Plus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||||| ||||||||||||||||| || ||||| || ||||| | | || ||| Sbjct 2784550 TTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTTA-CATGTTTGCAGA 2784608 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 | ||||||||||||||||||||||||| | | ||||| | || ||||| |||| Sbjct 2784609 GTCCTGTGTTTTTAGTAAACAGTCGCTACTCCCTATTTTGTG------CCACCTACTCA- 2784661 Query 122 CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAAT 181 || | | |||| || ||||||| |||||||||| || | |||||||| | Sbjct 2784662 -TAGTTGCCTAAAAGCA--GGTTACCCTTCTTCCGAAGTTACAGGTATAATTTGCCGAGT 2784718 Query 182 TCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTT 241 ||||| | || ||| | ||| ||||||||| |||||| | ||| ||||||||| Sbjct 2784719 TCCTTCAACATCATTCTTTC-AACACCTTAGTATACTCTACTCATCTACCAGTGTCGGTT 2784777 Query 242 TACGGTA 248 ||||||| Sbjct 2784778 TACGGTA 2784784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694385900208