Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1 291 2e-76 >seq1 Length=2798100 Score = 291 bits (322), Expect = 2e-76 Identities = 232/279 (83%), Gaps = 9/279 (3%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||| | |||||| ||| | || ||||||||| |||| | ||||||||| Sbjct 1124398 CGCGGGTACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAATGATGTTGGAGACAGT 1124339 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1124338 GGAGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1124279 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 |||||||||| | ||||||||||||||||||| |||||||| || ||||||| || Sbjct 1124278 TTAGGACCGTCAGTGTTACGGCCGCCGTTTACTGGGGCTTCAATGCAGAGCTT-GC---- 1124224 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 |||| | ||||||||||| ||||||||||||||||| ||||||||| ||||||| Sbjct 1124223 ----ACCCTTCCTATTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTT 1124168 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 | |||||||||||| ||||||||||| ||||||||||| Sbjct 1124167 ACATGTTTGCAGAGTCCTGTGTTTTTAGTAAACAGTCGC 1124129 Score = 291 bits (322), Expect = 2e-76 Identities = 232/279 (83%), Gaps = 9/279 (3%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||| | |||||| ||| | || ||||||||| |||| | ||||||||| Sbjct 2120264 CGCGGGTACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAATGATGTTGGAGACAGT 2120323 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2120324 GGAGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 2120383 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 |||||||||| | ||||||||||||||||||| |||||||| || ||||||| || Sbjct 2120384 TTAGGACCGTCAGTGTTACGGCCGCCGTTTACTGGGGCTTCAATGCAGAGCTT-GC---- 2120438 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 |||| | ||||||||||| ||||||||||||||||| ||||||||| ||||||| Sbjct 2120439 ----ACCCTTCCTATTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTT 2120494 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 | |||||||||||| ||||||||||| ||||||||||| Sbjct 2120495 ACATGTTTGCAGAGTCCTGTGTTTTTAGTAAACAGTCGC 2120533 Score = 291 bits (322), Expect = 2e-76 Identities = 232/279 (83%), Gaps = 9/279 (3%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||| | |||||| ||| | || ||||||||| |||| | ||||||||| Sbjct 2784365 CGCGGGTACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAATGATGTTGGAGACAGT 2784424 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2784425 GGAGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 2784484 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 |||||||||| | ||||||||||||||||||| |||||||| || ||||||| || Sbjct 2784485 TTAGGACCGTCAGTGTTACGGCCGCCGTTTACTGGGGCTTCAATGCAGAGCTT-GC---- 2784539 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 |||| | ||||||||||| ||||||||||||||||| ||||||||| ||||||| Sbjct 2784540 ----ACCCTTCCTATTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTT 2784595 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 | |||||||||||| ||||||||||| ||||||||||| Sbjct 2784596 ACATGTTTGCAGAGTCCTGTGTTTTTAGTAAACAGTCGC 2784634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260773573632