Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1 275 1e-71 >seq1 Length=2798100 Score = 275 bits (304), Expect = 1e-71 Identities = 282/367 (77%), Gaps = 21/367 (6%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||||| |||||| ||| |||| | ||||||| | || || | ||||||||| || Sbjct 1124392 TACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAATGATGTTGGAGACAGTGGAGAA 1124333 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1124332 ATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 1124273 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||| | |||||||||||||||||||||||| |||| ||| | |||| || Sbjct 1124272 CCGTCAGTGTTACGGCCGCCGTTTACTGGGGC-----TTCAATGCAGAGCTTGC----AC 1124222 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 ||| ||||||||||||||||||||||||||||| ||||||| || ||| | | Sbjct 1124221 CCTTCCTATTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTTACATGT 1124162 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT-GTCA 299 | ||||| ||||||||||| ||||||||||||| |||||| | ||| ||| ||| Sbjct 1124161 TTGCAGAGTCCTGTGTTTTTAGTAAACAGTCGCTACTCCCTATTTTGTGCCACCTACTCA 1124102 Query 300 TAG----------ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCC 349 ||| |||| ||||||| || ||||||| || | ||||||||||||| Sbjct 1124101 TAGTTGCCTAAAAGCAGGTTACCCTTCTTCCGAAGTTACAGGTATAATTTGCCGAGTTCC 1124042 Query 350 TT-AACA 355 || |||| Sbjct 1124041 TTCAACA 1124035 Score = 275 bits (304), Expect = 1e-71 Identities = 282/367 (77%), Gaps = 21/367 (6%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||||| |||||| ||| |||| | ||||||| | || || | ||||||||| || Sbjct 2120270 TACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAATGATGTTGGAGACAGTGGAGAA 2120329 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2120330 ATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 2120389 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||| | |||||||||||||||||||||||| |||| ||| | |||| || Sbjct 2120390 CCGTCAGTGTTACGGCCGCCGTTTACTGGGGC-----TTCAATGCAGAGCTTGC----AC 2120440 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 ||| ||||||||||||||||||||||||||||| ||||||| || ||| | | Sbjct 2120441 CCTTCCTATTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTTACATGT 2120500 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT-GTCA 299 | ||||| ||||||||||| ||||||||||||| |||||| | ||| ||| ||| Sbjct 2120501 TTGCAGAGTCCTGTGTTTTTAGTAAACAGTCGCTACTCCCTATTTTGTGCCACCTACTCA 2120560 Query 300 TAG----------ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCC 349 ||| |||| ||||||| || ||||||| || | ||||||||||||| Sbjct 2120561 TAGTTGCCTAAAAGCAGGTTACCCTTCTTCCGAAGTTACAGGTATAATTTGCCGAGTTCC 2120620 Query 350 TT-AACA 355 || |||| Sbjct 2120621 TTCAACA 2120627 Score = 275 bits (304), Expect = 1e-71 Identities = 282/367 (77%), Gaps = 21/367 (6%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||||| |||||| ||| |||| | ||||||| | || || | ||||||||| || Sbjct 2784371 TACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAATGATGTTGGAGACAGTGGAGAA 2784430 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2784431 ATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 2784490 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||| | |||||||||||||||||||||||| |||| ||| | |||| || Sbjct 2784491 CCGTCAGTGTTACGGCCGCCGTTTACTGGGGC-----TTCAATGCAGAGCTTGC----AC 2784541 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 ||| ||||||||||||||||||||||||||||| ||||||| || ||| | | Sbjct 2784542 CCTTCCTATTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTTACATGT 2784601 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT-GTCA 299 | ||||| ||||||||||| ||||||||||||| |||||| | ||| ||| ||| Sbjct 2784602 TTGCAGAGTCCTGTGTTTTTAGTAAACAGTCGCTACTCCCTATTTTGTGCCACCTACTCA 2784661 Query 300 TAG----------ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCC 349 ||| |||| ||||||| || ||||||| || | ||||||||||||| Sbjct 2784662 TAGTTGCCTAAAAGCAGGTTACCCTTCTTCCGAAGTTACAGGTATAATTTGCCGAGTTCC 2784721 Query 350 TT-AACA 355 || |||| Sbjct 2784722 TTCAACA 2784728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062377732096